RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LRP11Q86VZ4 500 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 UEVLDQ8IX04 471 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 OR4N5Q8IXE1 308 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 TBX5Q99593 518 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 EFCAB11Q9BUY7 163 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 GPR84Q9NQS5 396 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 TRMT112Q9UI30 125 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 PLAGL1Q9UM63 463 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 IFNL4K9M1U5 179 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 ADH5P11766 374 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 PCK2Q16822 640 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 DUSP28Q4G0W2 176 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SBSNQ6UWP8 590 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 GLB1LQ6UWU2 654 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 C16orf82Q7Z2V1 217 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SGPP2Q8IWX5 399 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 GP6Q9HCN6 339 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 TP53TG3Q9ULZ0 132 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 OARD1Q9Y530 152 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 CCDC88CQ9P219 2028 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 PLXNA1Q9UIW2 1896 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 A0A087WX48 190 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 FFAR2O15552 330 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SCGB2A1O75556 95 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 STK17BO94768 372 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 ABHD16AO95870 558 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SRFP11831 508 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 AADACP22760 399 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 NTSP30990 170 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 ACVR1BP36896 505 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SLC6A12P48065 614 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF83P51522 516 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 B4GALNT1Q00973 533 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 DCST2Q5T1A1 773 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 CPTPQ5TA50 214 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 CST9LP1Q5W188 147 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 STAC2Q6ZMT1 411 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 TPRG1Q6ZUI0 275 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 LRRC75AQ8NAA5 344 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 OR4K13Q8NH42 304 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 FAM213BQ8TBF2 198 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 APOBEC3DQ96AK3 386 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 TM2D1Q9BX74 207 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 RTN4RQ9BZR6 473 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 EGLN3Q9H6Z9 239 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 JKAMPQ9P055 326 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 ICAM5Q9UMF0 924 aa9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 COL4A4P53420 1690 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-210ENST00000508216 A6NDN8 102 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 H0Y980 276 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 RAB29O14966 203 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 GPR137BO60478 399 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 CLDN1O95832 211 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 GPX1P07203 203 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 REG1BP48304 166 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 ASCL1P50553 236 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 DMWDQ09019 674 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 PRICKLE4Q2TBC4 344 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 HOGA1Q86XE5 327 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 OR10V1Q8NGI7 309 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 MRPL24Q96A35 216 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 SCGB3A2Q96PL1 93 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 NKX2-4Q9H2Z4 354 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 NSG2Q9Y328 171 aa9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-210ENST00000508216 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 C9orf118A6NHY6 69 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 TMEM212A6NML5 194 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 KIR2DS3K7RE56 304 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 GPR182O15218 404 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 FUT1P19526 365 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 USF1P22415 310 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 GATA3P23771 443 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 BSGP35613 385 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 CCL20P78556 96 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 GGTLC2Q14390 218 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 KIR2DS3Q14952 304 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 COX20Q5RI15 118 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 STPG1Q5TH74 334 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 TTC9CQ8N5M4 171 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RNF128Q8TEB7 428 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RAB8BQ92930 207 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RNF183Q96D59 192 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 OR51I2Q9H344 312 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RARRES3Q9UL19 164 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 TRAPPC1Q9Y5R8 145 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 LCTP09848 1927 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms