RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ATP6V1C2Q8NEY4 427 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2M7Q8NG81 312 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4F15Q8NGB8 312 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6N1Q8NGY5 312 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2V1Q8NHB1 315 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OTOSQ8NHW6 89 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 NEIL3Q8TAT5 605 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 DYNC2LI1Q8TCX1 351 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 THEM6Q8WUY1 208 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 SPRYD4Q8WW59 207 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 PSMF1Q92530 271 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 FGF11Q92914 225 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 DLX4Q92988 240 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 BORCS5Q969J3 196 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 SPTSSAQ969W0 71 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC25A46Q96AG3 418 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 SMIM19Q96E16 107 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 ZMYND19Q96E35 227 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 C4orf36Q96KX1 117 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 CEP19Q96LK0 163 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 Q96M85 177 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 TSPAN32Q96QS1 320 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 OR11A1Q9GZK7 315 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 DCSTAMPQ9H295 470 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 SYT4Q9H2B2 425 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 C1orf198Q9H425 327 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 RERGLQ9H628 205 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 EXO5Q9H790 373 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF122Q9H9V4 155 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 ELL3Q9HB65 397 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 PLGRKTQ9HBL7 147 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 NEK6Q9HC98 313 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 EXOSC4Q9NPD3 245 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 ASCL3Q9NQ33 180 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 RPRD1BQ9NQG5 326 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 GLRX2Q9NS18 164 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 TXNL4BQ9NX01 149 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 GLTPQ9NZD2 209 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 CCDC59Q9P031 241 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 KCNN3Q9UGI6 736 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 GNG8Q9UK08 70 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 MCTS1Q9ULC4 181 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 B9D1Q9UPM9 204 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 LSM2Q9Y333 95 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 UGT2A1Q9Y4X1 527 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 PCM1Q15154 2024 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM131Q92545 1883 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZDBF2Q9HCK1 2354 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MUC6Q6W4X9 2439 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 IGLV1-36A0A0B4J1U3 117 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TRGV5A0A0B4J1U4 118 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM269A0A1B0GVZ9 245 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF222A6NCQ9 220 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CCDC182A6NF36 153 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TRABD2BA6NFA1 517 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ARGFXA6NJG6 315 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 LRRN3E7EW58 273 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MKRN2OSH3BPM6 223 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 M0R129 80 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MAGEB3O15480 346 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC19A2O60779 497 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 GLSO94925 669 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CDRT1O95170 752 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NDUFA7O95182 113 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 APOA1P02647 267 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PRB2P02812 416 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ISG15P05161 165 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 GYPBP06028 91 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ERCC1P07992 297 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPL3P09001 348 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 H2BFMP0C1H6 154 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OCM2P0CE71 109 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OCMP0CE72 109 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 UBCP0CG48 685 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PGA4P0DJD7 388 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PGA3P0DJD8 388 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CLUP10909 449 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SFTPCP11686 197 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SRMP19623 302 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ALOX5APP20292 161 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 MSR1P21757 451 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 HSD11B1P28845 292 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 PRDX2P32119 198 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SDC2P34741 201 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 TGFBR2P37173 567 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ETV6P41212 452 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NAA10P41227 235 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CRYBB2P43320 205 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 CSNK1A1P48729 337 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 DNASE1L1P49184 302 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 GDI2P50395 445 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ARHGDIBP52566 201 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF133P52736 654 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 SUCLG1P53597 346 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 BIDP55957 195 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 OR12D2P58182 307 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 NCS1P62166 190 aa1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 LSM3P62310 102 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-205ENST00000506779 GRB2P62993 217 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms