RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SUMF2Q8NBJ7 301 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 TMEM104Q8NE00 496 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM216AQ8WUB2 273 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 ZDHHC16Q969W1 377 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 DPCDQ9BVM2 203 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 C19orf24Q9BVV8 132 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 TAS2R3Q9NYW6 316 aa14.88□□□□□ -0.03
PDLIM7-209ENST00000503346 TRDV1A0A1B0GX56 115 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 HSPB6O14558 160 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 SLC22A1O15245 554 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 IGHV1-8P0DP01 117 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 MGMTP16455 207 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 SAA4P35542 130 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 TAF9Q16594 264 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 ZNF782Q6ZMW2 699 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 TRAPPC6BQ86SZ2 158 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 LDLRAD3Q86YD5 345 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 PNKDQ8N490 385 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 OR6M1Q8NGM8 313 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 GFI1Q99684 422 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 BARHL1Q9BZE3 327 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 CST11Q9H112 138 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 SPACA1Q9HBV2 294 aa14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 RCC2Q9P258 522 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-209ENST00000503346 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A10PA6NDY2 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A18PA6NE21 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A16PA6NEW6 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A20PA6NIJ5 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A8PA6NJQ4 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A7PA6NKC0 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A22PA8MWA6 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A12PA8MX19 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A5PA8MXJ8 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A23PA8MXZ1 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 CRTAPO75718 401 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 MELTFP08582 738 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A15PP0C7V4 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A13PP0C7W8 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A14PP0C7W9 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM90A24PP0C7X0 464 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 HTR2CP28335 458 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 SLC9A3R2Q15599 337 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 SYT6Q5T7P8 510 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 RSBN1Q5VWQ0 802 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 Q96M66 194 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 SELENOIQ9C0D9 397 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 GAL3ST2Q9H3Q3 398 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 BANF2Q9H503 90 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 OR6C3Q9NZP0 311 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM96BQ9Y3D0 163 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 AK6Q9Y3D8 172 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 SESN1Q9Y6P5 492 aa14.86□□□□□ -0.03
PDLIM7-209ENST00000503346 TRAV1-2A0A0B4J238 106 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 MEIOCA2RUB1 952 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 HOXA3O43365 443 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 CLPXO76031 633 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 RNASE1P07998 156 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 FBP1P09467 338 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 VSIG8P0DPA2 414 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 COX7A1P24310 79 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 TMEM86BQ8N661 226 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 OR13D1Q8NGV5 346 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 PLPPR1Q8TBJ4 325 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 SLC25A28Q96A46 364 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 DUX5Q96PT3 197 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 ING3Q9NXR8 418 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 KIF25Q9UIL4 384 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 COL6A5A8TX70 2615 aa14.85□□□□□ -0.03
PDLIM7-209ENST00000503346 MEIKINA0A087WXM9 373 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 SLC17A2O00624 439 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 TNFAIP8O95379 198 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 BPNT1O95861 308 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 CGB3P0DN86 165 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 CGB7P0DN87 165 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 PSMD7P51665 324 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 QRFPP83859 136 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 ATAD3CQ5T2N8 411 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 SLC35E4Q6ICL7 350 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 HEPN1Q6WQI6 88 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 OR11H6Q8NGC7 330 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 SPATA3Q8NHX4 192 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 SSMEM1Q8WWF3 244 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 FAM46BQ96A09 425 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 AJUBAQ96IF1 538 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 ZNRD1Q9P1U0 126 aa14.84□□□□□ -0.03
PDLIM7-209ENST00000503346 SHISA3A0PJX4 238 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 ZNF729A6NN14 1252 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 TMEM14DPA8MWL7 114 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 ODF3BA8MYP8 253 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 H3BUI4 141 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 MMP23AO75900 390 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 MPIG6BO95866 241 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 FGF9P31371 208 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 C17orf58Q2M2W7 97 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 ZNF626Q68DY1 528 aa14.83□□□□□ -0.04
PDLIM7-209ENST00000503346 OR10K2Q6IF99 312 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms