RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 RAB40AQ8WXH6 277 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 TMEM186Q96B77 213 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 DGCR14Q96DF8 476 aaKnown RBP16.58■□□□□ 0.24
CTSD-206ENST00000497544 NICN1Q9BSH3 213 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 DPCDQ9BVM2 203 aaPredicted RBP16.58■□□□□ 0.24
CTSD-206ENST00000497544 ATG5Q9H1Y0 275 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 ZNF581Q9P0T4 197 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 SPATA2Q9UM82 520 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 PEX16Q9Y5Y5 336 aa16.58■□□□□ 0.24
CTSD-206ENST00000497544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■□□□ 14.5
CTSD-206ENST00000497544 KIAA2026Q5HYC2 2103 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 TRAV20A0A0B4J274 112 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 PDCD6O75340 191 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 OR3A1P47881 315 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 KCNJ3P48549 501 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 EFNB2P52799 333 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 SIGIRRQ6IA17 410 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 BRICD5Q6PL45 260 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 GLCCI1Q86VQ1 547 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 FAM89BQ8N5H3 189 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 OR4M1Q8NGD0 313 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 ACOT12Q8WYK0 555 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 AP3S1Q92572 193 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 PHF21AQ96BD5 680 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 DCTN5Q9BTE1 182 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 PLEKHJ1Q9NW61 149 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 ING3Q9NXR8 418 aa16.57■□□□□ 0.24
CTSD-206ENST00000497544 MEGF8Q7Z7M0 2845 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 SOCS1O15524 211 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 ENSAO43768 121 aaKnown RBP16.56■□□□□ 0.24
CTSD-206ENST00000497544 IFNA2P01563 188 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 GLAP06280 429 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 DVL1P1P54792 670 aaPredicted RBP16.56■□□□□ 0.24
CTSD-206ENST00000497544 AESQ08117 197 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 NKAPLQ5M9Q1 402 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 MZT2AQ6P582 158 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 BTNL3Q6UXE8 466 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 DYNC2LI1Q8TCX1 351 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 NUDT16L1Q9BRJ7 211 aaKnown RBP16.56■□□□□ 0.24
CTSD-206ENST00000497544 HIF1ANQ9NWT6 349 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 COMMD3Q9UBI1 195 aa16.56■□□□□ 0.24
CTSD-206ENST00000497544 RPUSD1Q9UJJ7 312 aaKnown RBP16.56■□□□□ 0.24
CTSD-206ENST00000497544 TRBV23-1A0A0A0MS06 115 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 A0A0A6YYD4 124 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 PPIAL4CA0A0B4J2A2 164 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 A0A1W2PQ09 198 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 C22orf46C9J442 243 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 KCNAB3O43448 404 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 CD5LO43866 347 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 CSN2P05814 226 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 LIPFP07098 398 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 PPIAL4GP0DN37 164 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 ZNF16P17020 682 aaPredicted RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 CHATP28329 748 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 ERP29P30040 261 aaKnown RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 RPL31P62899 125 aaKnown RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 KRTAP1-1Q07627 177 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 DYNC1I2Q13409 638 aaKnown RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 ATXN7L3Q14CW9 347 aaPredicted RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 KRBOX4Q5JUW0 171 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 DCAF12L2Q5VW00 463 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 Q6ZTK2 550 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 FAM185AQ8N0U4 392 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 MMP26Q9NRE1 261 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 RHBDL2Q9NX52 303 aa16.55■□□□□ 0.24
CTSD-206ENST00000497544 RCC2Q9P258 522 aaKnown RBP16.55■□□□□ 0.24
CTSD-206ENST00000497544 IGHV2-70DA0A0C4DH43 119 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 KIR2DS1A0A191URI9 304 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 UBE2QL1A1L167 161 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 SCGNO76038 276 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 GATA3P23771 443 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 TPRX1Q8N7U7 411 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 SAMD12Q8N8I0 201 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 OR10R2Q8NGX6 335 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 C8orf46Q8TAG6 207 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 RAB3CQ96E17 227 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 CCDC59Q9P031 241 aaKnown RBP16.54■□□□□ 0.24
CTSD-206ENST00000497544 LPAR3Q9UBY5 353 aa16.54■□□□□ 0.24
CTSD-206ENST00000497544 A0A0G2JMP0 313 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 A0A0X1KG70 313 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 A0A1W2PPH5 198 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 hADV38S2A0JD32 116 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 GLIPR1P48060 266 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 P2RX3P56373 397 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 TMEM50BP56557 158 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 MEF2CQ06413 473 aaPredicted RBP16.53■□□□□ 0.24
CTSD-206ENST00000497544 FAHD2BQ6P2I3 314 aaPredicted RBP16.53■□□□□ 0.24
CTSD-206ENST00000497544 C6orf201Q7Z4U5 140 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 LY6G5BQ8NDX9 201 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 OR4M2Q8NGB6 313 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 PLPPR1Q8TBJ4 325 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 S100A16Q96FQ6 103 aaKnown RBP16.53■□□□□ 0.24
CTSD-206ENST00000497544 FAHD2AQ96GK7 314 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 DMRTB1Q96MA1 342 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 FAAP24Q9BTP7 215 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 YAE1D1Q9NRH1 226 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 C19orf12Q9NSK7 152 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 ETAA1Q9NY74 926 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 KCNS2Q9ULS6 477 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 HSF4Q9ULV5 492 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms