RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 PRNTQ86SH4 94 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 MRPL52Q86TS9 123 aaKnown RBP1.72□□□□□ -2.13
NCL-210ENST00000494618 OR8S1Q8NH09 359 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 DTD1Q8TEA8 209 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 BLNKQ8WV28 456 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 HINT2Q9BX68 163 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 BEX2Q9BXY8 128 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 CHRNA10Q9GZZ6 450 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 SLC25A31Q9H0C2 315 aa1.72□□□□□ -2.13
NCL-210ENST00000494618 RBMX2Q9Y388 322 aaKnown RBP1.72□□□□□ -2.13
NCL-210ENST00000494618 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
NCL-210ENST00000494618 USP42Q9H9J4 1324 aaKnown RBP1.71□□□□□ -2.14
NCL-210ENST00000494618 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 RBFOX3A6NFN3 312 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 YKT6O15498 198 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 MYO1DO94832 1006 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 SOD3P08294 240 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 CBX5P45973 191 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 GPR176Q14439 515 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 TRAM1Q15629 374 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 TNXAQ16473 311 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 BSXQ3C1V8 233 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 ACTBL2Q562R1 376 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 LAMTOR1Q6IAA8 161 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 GLYATQ6IB77 296 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 C10orf107Q8IVU9 208 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.71□□□□□ -2.14
NCL-210ENST00000494618 TNFRSF14Q92956 283 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 ZMYND19Q96E35 227 aaPredicted RBP1.71□□□□□ -2.14
NCL-210ENST00000494618 SUCNR1Q9BXA5 334 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 TMBIM4Q9HC24 238 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 NAGKQ9UJ70 344 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 ZNF337Q9Y3M9 751 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 FADS3Q9Y5Q0 445 aa1.71□□□□□ -2.14
NCL-210ENST00000494618 POLR3AO14802 1390 aaPredicted RBP1.71□□□□□ -2.14
NCL-210ENST00000494618 RIMBP3CA6NJZ7 1639 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 RIMBP3BA6NNM3 1639 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 RIMBP3Q9UFD9 1639 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 PLXNB3Q9ULL4 1909 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 RNASEK-C17orf49H0YIS7 233 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 CST4P01036 141 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 GTF2F2P13984 249 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 NQO2P16083 231 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 AKR1C4P17516 323 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 PYCR1P32322 319 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 UGT2B10P36537 528 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 HBG1P69891 147 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 HBG2P69892 147 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 TMEM241Q24JQ0 296 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 CEACAM21Q3KPI0 293 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 ERICH5Q6P6B1 374 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 VWDEQ8N2E2 1590 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 CLHC1Q8NHS4 586 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 CCL17Q92583 94 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 GTF2H4Q92759 462 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 PPWD1Q96BP3 646 aaKnown RBP1.7□□□□□ -2.14
NCL-210ENST00000494618 TRIB3Q96RU7 358 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 AGPAT3Q9NRZ7 376 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 SRCAPQ6ZRS2 3230 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 MIA3Q5JRA6 1907 aa1.7□□□□□ -2.14
NCL-210ENST00000494618 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
NCL-210ENST00000494618 TMEM131Q92545 1883 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 NOS1P29475 1434 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 TRAV8-3A0A0A6YYJ7 113 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 K7ERQ8 282 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 TCF21O43680 179 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 PSIP1O75475 530 aaKnown RBP1.69□□□□□ -2.14
NCL-210ENST00000494618 GPR75O95800 540 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 GUSBP08236 651 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 RAB25P57735 213 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 C1QTNF8P60827 252 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 BCL2A1Q16548 175 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 NXNL2Q5VZ03 156 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 FAM19A1Q7Z5A9 133 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 LRRC6Q86X45 466 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 NIT1Q86X76 327 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 SLC25A45Q8N413 288 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 FAM45AQ8TCE6 357 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 CLDN23Q96B33 292 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 FXYD5Q96DB9 178 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 FMC1Q96HJ9 113 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 CATSPER2Q96P56 530 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 OLFM3Q96PB7 478 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 BCL2L14Q9BZR8 327 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 CECR2Q9BXF3 1484 aa1.69□□□□□ -2.14
NCL-210ENST00000494618 IGHV1-45A0A0A0MS14 117 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 TRAV8-2A0A0B4J237 113 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 A0A0B4J2C4 111 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 A0A1B0GTI1 187 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 A0A1B0GW15 77 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 A0A1B0GXF2 115 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 ZNF729A6NN14 1252 aaPredicted RBP1.68□□□□□ -2.14
NCL-210ENST00000494618 F8VP50 259 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 CDIPTO14735 213 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 FFAR1O14842 300 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 POP7O75817 140 aaKnown RBP1.68□□□□□ -2.14
NCL-210ENST00000494618 LDOC1O95751 146 aaPredicted RBP1.68□□□□□ -2.14
NCL-210ENST00000494618 TRGV3P03979 118 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 ATF1P18846 271 aa1.68□□□□□ -2.14
NCL-210ENST00000494618 GZMHP20718 246 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms