RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 SHCBP1LQ9BZQ2 653 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 TMEM27Q9HBJ8 222 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 EXOSC4Q9NPD3 245 aaKnown RBP2.19□□□□□ -2.06
SNX13-209ENST00000492626 MMP26Q9NRE1 261 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 U3KQK5 164 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 AKAP13Q12802 2813 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 NBASA2RRP1 2371 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 A0A1W2PP18 115 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 ISPDA4D126 451 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 TRPC5OSA6NMA1 111 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 SRRM5B3KS81 715 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 TMEM114B3SHH9 223 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 ALOX12BO75342 701 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 IGKV3-15P01624 115 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 SERPINA7P05543 415 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 PRPS2P11908 318 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 REG3AQ06141 175 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 NAB1Q13506 487 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 PON3Q15166 354 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 RGNQ15493 299 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 LRRC34Q8IZ02 419 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 FAM9CQ8IZT9 166 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 SYS1Q8N2H4 156 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 LGALS14Q8TCE9 139 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 PHYHIPLQ96FC7 376 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 NRTNQ99748 197 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 SMR3AQ99954 134 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 CXCL16Q9H2A7 254 aa2.19□□□□□ -2.06
SNX13-209ENST00000492626 ANKRD20A5PA0PJZ0 165 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 GMNCA6NCL1 334 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 GOLGA6L4A6NEF3 574 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SLC22A5O76082 557 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 AQP8O94778 261 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 OR5F1O95221 314 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 PAEPP09466 180 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CD3GP09693 182 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CCL4P13236 92 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ZNF30P17039 623 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 KIR2DS1Q14954 304 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 NDUFA5Q16718 116 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TMEM249Q2WGJ8 235 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 C18orf21Q32NC0 220 aaPredicted RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 SNX29P2Q8IUI4 249 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ITPRIPQ8IWB1 547 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 MAPK1IP1LQ8NDC0 245 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 OR10G4Q8NGN3 311 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ANGPTL6Q8NI99 470 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TMIGD2Q96BF3 282 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ANKRD9Q96BM1 317 aaPredicted RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 RBMXL1Q96E39 390 aaKnown RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 OR2M2Q96R28 347 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ZNF382Q96SR6 550 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 VAT1Q99536 393 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 LLPHQ9BRT6 129 aaKnown RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 SLIRPQ9GZT3 109 aaKnown RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 SPNS1Q9H2V7 528 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SPACA1Q9HBV2 294 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 STX18Q9P2W9 335 aaKnown RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 HS3ST2Q9Y278 367 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 GOLGA6L10A6NI86 522 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ZNF99A8MXY4 864 aaPredicted RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 LINC00587B1AMM8 73 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 ATP6V1G2-DDX39BF2Z307 99 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 INS-IGF2F8WCM5 200 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 BIRC5O15392 142 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CYTH3O43739 400 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SPAG7O75391 227 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TRAPPC6AO75865 159 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 FADS2O95864 444 aaKnown RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 ADRB3P13945 408 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 FUT3P21217 361 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 FABP6P51161 128 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 NCBP2P52298 156 aaKnown RBP eCLIP2.18□□□□□ -2.06
SNX13-209ENST00000492626 FLOT2Q14254 428 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 IDNKQ5T6J7 187 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 OTPQ5XKR4 325 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 BHLHA15Q7RTS1 189 aaPredicted RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 C11orf42Q8N5U0 333 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CCNYL1Q8N7R7 359 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SUMF2Q8NBJ7 301 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 OR8G5Q8NG78 346 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 OR10J6PQ8NGY7 276 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 BAALCQ8WXS3 180 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 DNAJC9Q8WXX5 260 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CDS1Q92903 461 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SGTBQ96EQ0 304 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SMARCD1Q96GM5 515 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 FAM210BQ96KR6 192 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 KLF6Q99612 283 aaPredicted RBP2.18□□□□□ -2.06
SNX13-209ENST00000492626 DHRS9Q9BPW9 319 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 SEC22CQ9BRL7 303 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 MAP1LC3CQ9BXW4 147 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TOLLIPQ9H0E2 274 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TMBIM4Q9HC24 238 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 AP3M1Q9Y2T2 418 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 DOCK4Q8N1I0 1966 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 CFAP54Q96N23 3096 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 TRAV8-4A0A0B4J246 113 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 NKX2-6A6NCS4 301 aa2.18□□□□□ -2.06
SNX13-209ENST00000492626 NCBP2LA6PVI3 153 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms