RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ANKRD13BQ86YJ7 626 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 FGFRL1Q8N441 504 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 TMEM104Q8NE00 496 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 OR5D13Q8NGL4 314 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 PPP1R35Q8TAP8 253 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 Q96M66 194 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 RNF167Q9H6Y7 350 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 SCOCQ9UIL1 159 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 CMYA5Q8N3K9 4069 aa12.35□□□□□ -0.43
CDC42SE1-205ENST00000491825 IGHV3OR16-10A0A075B7F0 116 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TRAV40A0A0B4J280 105 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 SIRPB1O00241 398 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TMEM127O75204 238 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 NDUFB7P17568 137 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 OR3A1P47881 315 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 UNC119Q13432 240 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 FAM3DQ96BQ1 224 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TM2D1Q9BX74 207 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 MS4A7Q9GZW8 240 aaPredicted RBP12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-205ENST00000491825 TRAV24A0A0B4J272 114 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 H3BUI4 141 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 MGST3O14880 152 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 DEGS1O15121 323 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 GABRR1P24046 479 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 ERP29P30040 261 aaKnown RBP12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 KCNJ3P48549 501 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 RPS27AP62979 156 aaKnown RBP12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 P2RY14Q15391 338 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 GRK1Q15835 563 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 SFXN4Q6P4A7 337 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 KIR3DL3Q8N743 410 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 TAF15Q92804 592 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 PRDM13Q9H4Q3 707 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 BANF2Q9H503 90 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 LIN7BQ9HAP6 207 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 DSCAML1Q8TD84 2053 aa12.33□□□□□ -0.44
CDC42SE1-205ENST00000491825 MDFIC2A0A1B0GVS7 189 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 MPIG6BO95866 241 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 IL1AP01583 271 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 P2RX3P56373 397 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 CLDN12P56749 244 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 SCAND1P57086 179 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 MEF2CQ06413 473 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 TAF9Q16594 264 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 CTF1Q16619 201 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 HES5Q5TA89 166 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 CROCCP3Q8IVE0 287 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 H1FXQ92522 213 aaKnown RBP12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 PTX4Q96A99 478 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 CHST6Q9GZX3 395 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 UNKLQ9H9P5 680 aaKnown RBP12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 C19orf12Q9NSK7 152 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
CDC42SE1-205ENST00000491825 KCNAB3O43448 404 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 GLAP06280 429 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 TGFBR1P36897 503 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 NCS1P62166 190 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 LSM3P62310 102 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 MXD1Q05195 221 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 SCN1BQ07699 218 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 OR10K2Q6IF99 312 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 KCNK15Q9H427 330 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 NCOR1P1Q9H4R4 102 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
CDC42SE1-205ENST00000491825 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 FUOMA2VDF0 154 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 M0R1W7 72 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 CLEC2LP0C7M8 214 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 MMP9P14780 707 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 RAB6AP20340 208 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 VBP1P61758 197 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 PDCD1Q15116 288 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
CDC42SE1-205ENST00000491825 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms