RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RTTNQ86VV8 2226 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 ARID1AO14497 2285 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 CHD3Q12873 2000 aaKnown RBP8.02□□□□□ -1.13
BRCA1-219ENST00000491747 BPNT1O95861 308 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 OR4A8P0C604 315 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 MSR1P21757 451 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 SERPINF1P36955 418 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 S100A12P80511 92 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 TMEM128Q5BJH2 165 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 Q5PR19 223 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 DRAM2Q6UX65 266 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-219ENST00000491747 CBLN2Q8IUK8 224 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 UQCC2Q9BRT2 126 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 OR2H1Q9GZK4 316 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 IFT22Q9H7X7 185 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 TREM1Q9NP99 234 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 ZFP57Q9NU63 452 aa8.02□□□□□ -1.13
BRCA1-219ENST00000491747 MED13LQ71F56 2210 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 ATP5J2P56134 94 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 ZNF774Q6NX45 483 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 DPPA2Q7Z7J5 298 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 ADAD2Q8NCV1 583 aaKnown RBP8.01□□□□□ -1.13
BRCA1-219ENST00000491747 SLC26A10Q8NG04 563 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 TMED6Q8WW62 240 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 C11orf40Q8WZ69 217 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 SELENOIQ9C0D9 397 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 TLNRD1Q9H1K6 362 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 RHBDD3Q9Y3P4 386 aa8.01□□□□□ -1.13
BRCA1-219ENST00000491747 A0A0B4J2A0 478 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 PQLC2LA1A4F0 135 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ZNF705EA8MWA4 302 aaPredicted RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 HEXAP06865 529 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 H2BFMP0C1H6 154 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 GNALP38405 381 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 MMP16P51512 607 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ERVS71-1P61550 626 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 PJVKQ0ZLH3 352 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 UNC119Q13432 240 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 EIF5AL1Q6IS14 154 aaKnown RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 LRP11Q86VZ4 500 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 HOGA1Q86XE5 327 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 OR4K15Q8NH41 348 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 CMBLQ96DG6 245 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 POM121L2Q96KW2 1035 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ADAT1Q9BUB4 502 aaKnown RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 TMUB1Q9BVT8 246 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 OR51B6Q9H340 312 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ZNF442Q9H7R0 627 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 SHPKQ9UHJ6 478 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 FZR1Q9UM11 496 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 P2RY10O00398 339 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 APOC1P02654 83 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 CHRM2P08172 466 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 PET100P0DJ07 73 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 GNB3P16520 340 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 EIF5AP63241 154 aaKnown RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 KCNMB1Q16558 191 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 PCK2Q16822 640 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 SLC22A6Q4U2R8 563 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ACTBL2Q562R1 376 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 CIARTQ8N365 385 aaPredicted RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 ARRDC1Q8N5I2 433 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ZSCAN4Q8NAM6 433 aaPredicted RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 OR5D14Q8NGL3 314 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 OR10R2Q8NGX6 335 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 TERB2Q8NHR7 220 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 MARCH1Q8TCQ1 289 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 ST7LQ8TDW4 575 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 GLYATL2Q8WU03 294 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 FGGYQ96C11 551 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 Q96MF0 132 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 SCGB3A2Q96PL1 93 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 MRPL37Q9BZE1 423 aaKnown RBP8□□□□□ -1.13
BRCA1-219ENST00000491747 RAB18Q9NP72 206 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 LPAR3Q9UBY5 353 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 TIMM10BQ9Y5J6 103 aa8□□□□□ -1.13
BRCA1-219ENST00000491747 KCNAB3O43448 404 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 SYT7O43581 403 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 LY6HO94772 140 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 PMP2P02689 132 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 CCNOP22674 350 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 GLRXP35754 106 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 WNT5AP41221 380 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 GUCA1AP43080 201 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-219ENST00000491747 PLP2Q04941 152 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 EFNB3Q15768 340 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 TBC1D28Q2M2D7 210 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 AVPI1Q5T686 147 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 PRSS54Q6PEW0 395 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 PRSS57Q6UWY2 283 aa7.99□□□□□ -1.13
BRCA1-219ENST00000491747 ZCCHC24Q8N2G6 241 aaKnown RBP7.99□□□□□ -1.13
BRCA1-219ENST00000491747 OR52N4Q8NGI2 321 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms