RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 OR51D1Q8NGF3 324 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 OR13F1Q8NGS4 319 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 CST11Q9H112 138 aa11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-208ENST00000490348 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A0B4J203 849 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 ODAMA1E959 279 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 ARSBP15848 533 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 PRTN3P24158 256 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 SDC2P34741 201 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 PAX5Q02548 391 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 RSBN1Q5VWQ0 802 aaPredicted RBP11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 RTN4RL2Q86UN3 420 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM3DQ96BQ1 224 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 SLC6A7Q99884 636 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 NICN1Q9BSH3 213 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
SRGAP3-208ENST00000490348 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 AIPO00170 330 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 PDCD5O14737 125 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 CLEC2LP0C7M8 214 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 PSMD7P51665 324 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 ATAD3CQ5T2N8 411 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 C9orf139Q6ZV77 190 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 PNKDQ8N490 385 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 KCTD7Q96MP8 289 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 TMEM59Q9BXS4 323 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 KIF25Q9UIL4 384 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
SRGAP3-208ENST00000490348 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 MMP23AO75900 390 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 IGHV1-69P01742 117 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 TFAP2AP05549 437 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 SLC2A2P11168 524 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 RAB12Q6IQ22 244 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 CORO2AQ92828 525 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 ZNF714Q96N38 554 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FUNDC2Q9BWH2 189 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FBLN5Q9UBX5 448 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 TRAV39A0A0B4J263 110 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 TMEM272A0A1B0GTI8 110 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A1W2PPH5 198 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 AIREO43918 545 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 CGB3P0DN86 165 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 CGB7P0DN87 165 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 KCNJ3P48549 501 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 EFNB2P52799 333 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 MXD1Q05195 221 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 BAIAP2L2Q6UXY1 529 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 ZNF782Q6ZMW2 699 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 GDPGP1Q6ZNW5 385 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 OR2W3Q7Z3T1 314 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 TPRA1Q86W33 373 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 DYRK2Q92630 601 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 LIN7BQ9HAP6 207 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 PEX16Q9Y5Y5 336 aa11.75□□□□□ -0.53
SRGAP3-208ENST00000490348 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
SRGAP3-208ENST00000490348 PDCD6O75340 191 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms