RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZFP41Q8N8Y5 198 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 OR13C5Q8NGS8 318 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 THRSPQ92748 146 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 COQ2Q96H96 371 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 PLCXD1Q9NUJ7 323 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 IL36GQ9NZH8 169 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 PSORS1C1Q9UIG5 152 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 ERGIC3Q9Y282 383 aa14.1□□□□□ -0.15
SEC13-218ENST00000490283 TRBV5-5A0A0J9YX44 114 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 PNMA8CA0A1B0GUJ8 204 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 CHST1O43916 411 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 MMP23AO75900 390 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 CDRT1O95170 752 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 C21orf33P30042 268 aaPredicted RBP14.09□□□□□ -0.15
SEC13-218ENST00000490283 CEACAM3P40198 252 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 RAB13P51153 203 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 PRRX1P54821 245 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 WNT4P56705 351 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 KRTAP10-3P60369 221 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 PIGYQ3MUY2 71 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 ARSJQ5FYB0 599 aaPredicted RBP14.09□□□□□ -0.15
SEC13-218ENST00000490283 ASCL4Q6XD76 172 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 LINC00596Q86U02 117 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 PIFOQ8TCI5 191 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 CAPSLQ8WWF8 208 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 ZNF184Q99676 751 aaPredicted RBP14.09□□□□□ -0.15
SEC13-218ENST00000490283 MMP27Q9H306 513 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 DPM3Q9P2X0 92 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 ST3GAL6Q9Y274 331 aa14.09□□□□□ -0.15
SEC13-218ENST00000490283 LEUTXA8MZ59 168 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 OR7C1O76099 320 aaPredicted RBP14.08□□□□□ -0.16
SEC13-218ENST00000490283 FSTP19883 344 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 SERPINA2P20848 420 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 MAPK3P27361 379 aaPredicted RBP14.08□□□□□ -0.16
SEC13-218ENST00000490283 BRS3P32247 399 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 BDH1Q02338 343 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 GPR176Q14439 515 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 HERPUD1Q15011 391 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 C2orf68Q2NKX9 166 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 Q8NFD4 153 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 FBLIM1Q8WUP2 373 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 PGLYRP3Q96LB9 341 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 OR14A2Q96R54 314 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 PPIL3Q9H2H8 161 aaKnown RBP14.08□□□□□ -0.16
SEC13-218ENST00000490283 NCOR1P1Q9H4R4 102 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 KIF25Q9UIL4 384 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 SIGLEC9Q9Y336 463 aa14.08□□□□□ -0.16
SEC13-218ENST00000490283 TRAV24A0A0B4J272 114 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 KBTBD11-OT1A0A1B0GTJ5 212 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 FAM172BPA6NC97 362 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 A6NDX4 124 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 PEX14O75381 377 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 GPX5O75715 221 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 GTF2F2P13984 249 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 IGFBP3P17936 291 aaPredicted RBP14.07□□□□□ -0.16
SEC13-218ENST00000490283 CELP19835 753 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 NFYBP25208 207 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 CD34P28906 385 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 EFNB2P52799 333 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 RBM11P57052 281 aaKnown RBP14.07□□□□□ -0.16
SEC13-218ENST00000490283 RBM39Q14498 530 aaKnown RBP14.07□□□□□ -0.16
SEC13-218ENST00000490283 NHLRC3Q5JS37 347 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 LDLRAD2Q5SZI1 272 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 TMEM219Q86XT9 240 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 JAGN1Q8N5M9 183 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 ZNF485Q8NCK3 441 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 TFAP2CQ92754 450 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 ORAI1Q96D31 301 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 AKR1E2Q96JD6 320 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 DPCDQ9BVM2 203 aaPredicted RBP14.07□□□□□ -0.16
SEC13-218ENST00000490283 PRSS22Q9GZN4 317 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 SCN3BQ9NY72 215 aa14.07□□□□□ -0.16
SEC13-218ENST00000490283 CD1AP06126 327 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 VSIG10L2P0DP72 767 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 MPV17LQ2QL34 196 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 HLA-DRB5Q30154 266 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 SLC22A6Q4U2R8 563 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 CCDC144NLQ6NUI1 221 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 KLHDC1Q8N7A1 406 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 SUMF2Q8NBJ7 301 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 NEK7Q8TDX7 302 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 MYDGFQ969H8 173 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 MND1Q9BWT6 205 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 ZNF286AQ9HBT8 521 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 CALYQ9NYX4 217 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 FOXJ3Q9UPW0 622 aa14.06□□□□□ -0.16
SEC13-218ENST00000490283 AMMECR1Q9Y4X0 333 aaPredicted RBP14.06□□□□□ -0.16
SEC13-218ENST00000490283 A0A1W2PPK0 400 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 IL1AP01583 271 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 MNDAP41218 407 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 RPS11P62280 158 aaKnown RBP eCLIP14.05□□□□□ -0.16
SEC13-218ENST00000490283 PAX5Q02548 391 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 C17orf58Q2M2W7 97 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 ATAD3CQ5T2N8 411 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 RSBN1Q5VWQ0 802 aaPredicted RBP14.05□□□□□ -0.16
SEC13-218ENST00000490283 LAIR2Q6ISS4 152 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
SEC13-218ENST00000490283 BAIAP2L2Q6UXY1 529 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 NANOGP1Q8N7R0 232 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms