RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 AMMECR1Q9Y4X0 333 aaPredicted RBP1.42□□□□□ -2.18
CCDC39-206ENST00000489868 PHLDA3Q9Y5J5 127 aa1.42□□□□□ -2.18
CCDC39-206ENST00000489868 DOCK10Q96BY6 2186 aa1.42□□□□□ -2.18
CCDC39-206ENST00000489868 KNCNA6PVL3 124 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 KLRC4-KLRK1H3BQV0 150 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 POP7O75817 140 aaKnown RBP1.41□□□□□ -2.18
CCDC39-206ENST00000489868 MSR1P21757 451 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 XKP51811 444 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 PLTPP55058 493 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 TMEM176BQ3YBM2 270 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-206ENST00000489868 NXNL2Q5VZ03 156 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 OR10P1Q8NGE3 313 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 REEP6Q96HR9 211 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 UTP23Q9BRU9 249 aaKnown RBP1.41□□□□□ -2.18
CCDC39-206ENST00000489868 NXF2Q9GZY0 626 aaKnown RBP1.41□□□□□ -2.18
CCDC39-206ENST00000489868 CXCL16Q9H2A7 254 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 MFSD1Q9H3U5 465 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 DDX18Q9NVP1 670 aaKnown RBP1.41□□□□□ -2.18
CCDC39-206ENST00000489868 IFNKQ9P0W0 207 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 V9GYY9 64 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 CACNA1SQ13698 1873 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 MPDZO75970 2070 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 ATG2BQ96BY7 2078 aa1.41□□□□□ -2.18
CCDC39-206ENST00000489868 TRPM3Q9HCF6 1732 aaPredicted RBP1.4□□□□□ -2.18
CCDC39-206ENST00000489868 TP53I11O14683 189 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 SOX14O95416 240 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 IGKV5-2P06315 115 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 ELK4P28324 431 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 SPIN4Q56A73 249 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 OR51Q1Q8NH59 317 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 MAP1LC3CQ9BXW4 147 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 SLC25A31Q9H0C2 315 aa1.4□□□□□ -2.19
CCDC39-206ENST00000489868 CEP170Q5SW79 1584 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 TRAV8-3A0A0A6YYJ7 113 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 PGPA6NDG6 321 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 EEF1E1O43324 174 aaKnown RBP1.39□□□□□ -2.19
CCDC39-206ENST00000489868 GUSBP08236 651 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 GUSBP1Q15486 140 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 Q6ZSA8 131 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 KRTCAP2Q8N6L1 136 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 ZIC4Q8N9L1 334 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 FER1L6-AS1Q8NA97 138 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 HIST1H2BAQ96A08 127 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 FAM131CQ96AQ9 280 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 ZNF625Q96I27 306 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-206ENST00000489868 DNAJC27Q9NZQ0 273 aa1.39□□□□□ -2.19
CCDC39-206ENST00000489868 LOC102725191A0A1B0GVB3 256 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 A0A1W2PPV4 95 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 ZNF860A6NHJ4 632 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 TCF21O43680 179 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 MMDQ15546 238 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 CACNG8Q8WXS5 425 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 VAT1Q99536 393 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 TAS2R9Q9NYW1 312 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 BTRCQ9Y297 605 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 CHTOPQ9Y3Y2 248 aaKnown RBP1.38□□□□□ -2.19
CCDC39-206ENST00000489868 COL18A1P39060 1754 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 TRPM6Q9BX84 2022 aa1.38□□□□□ -2.19
CCDC39-206ENST00000489868 YLPM1P49750 1951 aaKnown RBP1.38□□□□□ -2.19
CCDC39-206ENST00000489868 AQRO60306 1485 aaKnown RBP eCLIP1.37□□□□□ -2.19
CCDC39-206ENST00000489868 SLIT2O94813 1529 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 C19orf71A6NCJ1 209 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 PRMT5O14744 637 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-206ENST00000489868 KDELR3O43731 214 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 CA2P00918 260 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 GYPCP04921 128 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 GABRA4P48169 554 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 GCLMP48507 274 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 APOFQ13790 326 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 GOLGA7BQ2TAP0 167 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 CEACAM21Q3KPI0 293 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 NIT1Q86X76 327 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 DRAXINQ8NBI3 349 aaPredicted RBP1.37□□□□□ -2.19
CCDC39-206ENST00000489868 OR4C16Q8NGL9 310 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 KCTD4Q8WVF5 259 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 BIRC8Q96P09 236 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 ZNF251Q9BRH9 671 aa1.37□□□□□ -2.19
CCDC39-206ENST00000489868 IGHV2-26A0A0B4J1V2 119 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 RAB36O95755 333 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 SNAI1O95863 264 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-206ENST00000489868 MBP02144 154 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 SFTPCP11686 197 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 ARR3P36575 388 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 ATP5J2P56134 94 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 PRDX4Q13162 271 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 RBM45Q8IUH3 476 aaKnown RBP1.36□□□□□ -2.19
CCDC39-206ENST00000489868 DOK4Q8TEW6 326 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 DDIT4LQ96D03 193 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 DNAJC30Q96LL9 226 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 ZNF396Q96N95 335 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-206ENST00000489868 ALX4Q9H161 411 aaPredicted RBP1.36□□□□□ -2.19
CCDC39-206ENST00000489868 CRLF2Q9HC73 371 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 ANKHQ9HCJ1 492 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 KCNIP2Q9NS61 270 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 SDHAF2Q9NX18 166 aa1.36□□□□□ -2.19
CCDC39-206ENST00000489868 CRB1P82279 1406 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 LAMB2P55268 1798 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 H3BRN7 92 aa1.35□□□□□ -2.19
CCDC39-206ENST00000489868 ENSAO43768 121 aaKnown RBP1.35□□□□□ -2.19
CCDC39-206ENST00000489868 SLC25A20O43772 301 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms