RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LHX5Q9H2C1 402 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 JPT2Q9H910 190 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 C12orf4Q9NQ89 552 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 GID8Q9NWU2 228 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 ASF1AQ9Y294 204 aa2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 MYH9P35579 1960 aaKnown RBP2.34□□□□□ -2.04
DEPDC1-204ENST00000489862 CUL9Q8IWT3 2517 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 PRRC2BQ5JSZ5 2229 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A0J9YXV3 536 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 VPS37CA5D8V6 355 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 GOLGA6L4A6NEF3 574 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 SMIM23A6NLE4 172 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 M0R036 132 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 FABP7O15540 132 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC22A5O76082 557 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 DUSP14O95147 198 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 MOSP00540 346 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CD5P06127 495 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CSF3P09919 207 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 HIST1H1EP10412 219 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CELP19835 753 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 DTYMKP23919 212 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 AK4P27144 223 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CASP1P29466 404 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CD52P31358 61 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CDKN2DP55273 166 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ARF6P62330 175 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 LAMTOR4Q0VGL1 99 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 SRSF6Q13247 344 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF235Q14590 738 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF239Q16600 458 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 SPIN3Q5JUX0 258 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 C1orf146Q5VVC0 180 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 FBXW9Q5XUX1 488 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 LPCAT4Q643R3 524 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 KCTD16Q68DU8 428 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF613Q6PF04 617 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 WDR74Q6RFH5 385 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM92BQ6ZTR7 304 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 OR6V1Q8N148 313 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 LINC00337Q8N6G1 96 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM252Q8N6L7 170 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF614Q8N883 585 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 GPR32P1Q8NGA4 272 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 OR51S1Q8NGJ8 323 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM45AQ8TCE6 357 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 VN1R17PQ8TDU5 208 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 NEK7Q8TDX7 302 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 NELFBQ8WX92 580 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 RGP1Q92546 391 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 FMC1Q96HJ9 113 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 PRRT1Q99946 306 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM109Q9BVC6 243 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 TSGA10Q9BZW7 698 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 OR51I1Q9H343 314 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 RRAGDQ9NQL2 400 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 C8orf4Q9NR00 106 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF226Q9NYT6 803 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 CTSZQ9UBR2 303 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 NDRG2Q9UN36 371 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF337Q9Y3M9 751 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 ORC6Q9Y5N6 252 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 WDFY4Q6ZS81 3184 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 GBF1Q92538 1859 aa2.33□□□□□ -2.04
DEPDC1-204ENST00000489862 IGKV1-27A0A075B6S5 117 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 SMIM9A6NGZ8 99 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 E5RI56 91 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 C8orf87E5RJ46 101 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 H3BNH8 94 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 ACOX3O15254 700 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CRXO43186 299 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 KLRC4O43908 158 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM189A1O60320 539 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 EPPINO95925 133 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 P01737 135 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 RLN2P04090 185 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 ISG15P05161 165 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 H2AFZP0C0S5 128 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 TCN2P20062 427 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 RPL12P30050 165 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 NTSP30990 170 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 DRD3P35462 400 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CTRLP40313 264 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 ERFP50548 548 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FMODQ06828 376 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 RBMY1FQ15415 496 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 PRR4Q16378 134 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 PAGE3Q5JUK9 113 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CLLU1OSQ5K130 101 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 STEAP4Q687X5 459 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 LRRN1Q6UXK5 716 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FBXW12Q6X9E4 464 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CCDC121Q6ZUS5 278 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM231DQ6ZW35 169 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 RIMKLAQ8IXN7 391 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 TBC1D19Q8N5T2 526 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms