RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 TTRP02766 147 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 SEMG1P04279 462 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 COX4I1P13073 169 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 ZNF44P15621 663 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 C21orf33P30042 268 aaPredicted RBP7.14□□□□□ -1.27
COL17A1-207ENST00000488320 KIR3DL2P43630 455 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 RAB9AP51151 201 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 ATP1B3P54709 279 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 PPP1R8Q12972 351 aaKnown RBP7.14□□□□□ -1.27
COL17A1-207ENST00000488320 KIAA0141Q14154 515 aaPredicted RBP7.14□□□□□ -1.27
COL17A1-207ENST00000488320 UBE2V2Q15819 145 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 SPIN3Q5JUX0 258 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 BCL2L15Q5TBC7 163 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 RNLSQ5VYX0 342 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 ZNF679Q8IYX0 411 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 IQCF1Q8N6M8 205 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 KIRREL1Q96J84 757 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 GORASP2Q9H8Y8 452 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 IDI2-AS1Q9NZ38 188 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 OR6C3Q9NZP0 311 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 STUB1Q9UNE7 303 aa7.14□□□□□ -1.27
COL17A1-207ENST00000488320 TRBV2A0A0J9YWF9 115 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 A0A1B0GTI1 187 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 GATBO75879 557 aaKnown RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 MOSP00540 346 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 IGF1P05019 195 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 MRPL3P09001 348 aaKnown RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 SNRPBP14678 240 aaKnown RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 GLP1RP43220 463 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 HMGA2P52926 109 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ACTR3P61158 418 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 PSME3P61289 254 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 MFGE8Q08431 387 aaPredicted RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ATXN7L3Q14CW9 347 aaPredicted RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ODF4Q2M2E3 257 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 GTSCR1Q86UQ5 136 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ELMOD2Q8IZ81 293 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 RPP25LQ8N5L8 163 aaKnown RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 Q8N6K4 173 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 RFESDQ8TAC1 157 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 MYOZ3Q8TDC0 251 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ADI1Q9BV57 179 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 YIPF3Q9GZM5 350 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 CALYQ9NYX4 217 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 ZNF107Q9UII5 783 aaPredicted RBP7.13□□□□□ -1.27
COL17A1-207ENST00000488320 OR52A1Q9UKL2 312 aa7.13□□□□□ -1.27
COL17A1-207ENST00000488320 IGHV4OR15-8A0A075B7B6 117 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 A0A087WW49 117 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 DHRS7CA6NNS2 312 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 G3V318 75 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 DEGS1O15121 323 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 PRODHO43272 600 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 CD1BP29016 333 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 PPIFP30405 207 aaKnown RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 RBP2P50120 134 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 F2RL1P55085 397 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 ZNF816Q0VGE8 651 aaPredicted RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 PMS2P11Q13670 270 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 GALEQ14376 348 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 SLC35D3Q5M8T2 416 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 C8orf82Q6P1X6 216 aaPredicted RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 CPOQ8IVL8 374 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 IZUMO1Q8IYV9 350 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 OR8H1Q8NGG4 311 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 ASB17Q8WXJ9 295 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 ATP6V1G3Q96LB4 118 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 NSMCE2Q96MF7 247 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 PPIL3Q9H2H8 161 aaKnown RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 HIPK2Q9H2X6 1198 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 MOB1AQ9H8S9 216 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 HMG20AQ9NP66 347 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 PLSCR3Q9NRY6 295 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 MRPS28Q9Y2Q9 187 aaKnown RBP7.12□□□□□ -1.27
COL17A1-207ENST00000488320 SNX5Q9Y5X3 404 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 TMEM14AQ9Y6G1 99 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 CEPT1Q9Y6K0 416 aa7.12□□□□□ -1.27
COL17A1-207ENST00000488320 MEIKINA0A087WXM9 373 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 CXorf65A6NEN9 183 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 H0Y980 276 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 SYT7O43581 403 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 BRI3O95415 125 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 HSPB1P04792 205 aaKnown RBP7.11□□□□□ -1.27
COL17A1-207ENST00000488320 OCM2P0CE71 109 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 OCMP0CE72 109 aaPredicted RBP7.11□□□□□ -1.27
COL17A1-207ENST00000488320 SLC2A2P11168 524 aaPredicted RBP7.11□□□□□ -1.27
COL17A1-207ENST00000488320 HTR1FP30939 366 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 MTCP1P56278 107 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 APOFQ13790 326 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 MICAQ29983 383 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 SLC16A12Q6ZSM3 486 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 BBS1Q8NFJ9 593 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 COQ2Q96H96 371 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 APOL4Q9BPW4 351 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 OSBPL10Q9BXB5 764 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 DGCR6LQ9BY27 220 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 TOLLIPQ9H0E2 274 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 ZCCHC4Q9H5U6 513 aa7.11□□□□□ -1.27
COL17A1-207ENST00000488320 PARP11Q9NR21 331 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms