RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
U2AF1-211ENST00000486519 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-211ENST00000486519 TRAV41A0A0B4J266 112 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 NME4O00746 187 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 GSTA4O15217 222 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 MOSP00540 346 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 TFAP2AP05549 437 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 H2AFXP16104 143 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-211ENST00000486519 BLVRBP30043 206 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-211ENST00000486519 GLP1RP43220 463 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 BLVRAP53004 296 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 CD81P60033 236 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 NDPQ00604 133 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 OSBPL10Q9BXB5 764 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 OR51V1Q9H2C8 321 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 IDI2-AS1Q9NZ38 188 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 MYRFQ9Y2G1 1151 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
U2AF1-211ENST00000486519 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
U2AF1-211ENST00000486519 IGHV7-81A0A0B4J1V7 117 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 TRAV39A0A0B4J263 110 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 TRBV2A0A0J9YWF9 115 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 CNIH1O95406 144 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 GAPDHP04406 335 aaKnown RBP11.46□□□□□ -0.57
U2AF1-211ENST00000486519 GALEQ14376 348 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 IQCF1Q8N6M8 205 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 RITA1Q96K30 269 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 ZCCHC4Q9H5U6 513 aa11.46□□□□□ -0.57
U2AF1-211ENST00000486519 NUFIP1Q9UHK0 495 aaKnown RBP11.46□□□□□ -0.57
U2AF1-211ENST00000486519 A0A1W2PN81 502 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 H0Y980 276 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 SRSF10O75494 262 aaKnown RBP11.45□□□□□ -0.58
U2AF1-211ENST00000486519 NPPAP01160 153 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 SEMG1P04279 462 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 ALOX5APP20292 161 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 RRM2P31350 389 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 CHRNA7P36544 502 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 SCN1BQ07699 218 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 ECSCRQ19T08 205 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 COQ5Q5HYK3 327 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 ENTHD1Q8IYW4 607 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-211ENST00000486519 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 GLS2Q9UI32 602 aa11.45□□□□□ -0.58
U2AF1-211ENST00000486519 IGKV1-12A0A0C4DH73 117 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 MAGEB4O15481 346 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 GASTP01350 101 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 IGKV1D-12P01611 117 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 CD1BP29016 333 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 HTR1FP30939 366 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 SSTR5P35346 364 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 BNIP1Q12981 228 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 Q6P435 159 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 PLEKHG7Q6ZR37 379 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 TMEM179BQ7Z7N9 219 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 RTN4IP1Q8WWV3 396 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 FLYWCH2Q96CP2 140 aaKnown RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 RCN3Q96D15 328 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 MBOAT4Q96T53 435 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 HMG20AQ9NP66 347 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 EXOSC4Q9NPD3 245 aaKnown RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 INTS9Q9NV88 658 aaKnown RBP11.44□□□□□ -0.58
U2AF1-211ENST00000486519 KIF25Q9UIL4 384 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 COPS3Q9UNS2 423 aa11.44□□□□□ -0.58
U2AF1-211ENST00000486519 ACOD1A6NK06 481 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 NPIPB11E5RHQ5 1161 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-211ENST00000486519 HSPB6O14558 160 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 IL1AP01583 271 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 CSN3P07498 182 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 FASP25445 335 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 VHLP40337 213 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 CDC42P60953 191 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 RPL13AP3Q6NVV1 102 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 Q6ZSR3 168 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 RASSF6Q6ZTQ3 369 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 LINC00336Q6ZUF6 198 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 YIPF7Q8N8F6 280 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 BBS1Q8NFJ9 593 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 STON2Q8WXE9 905 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
U2AF1-211ENST00000486519 RHOVQ96L33 236 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 LRGUKQ96M69 825 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 MS4A10Q96PG2 267 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 CCDC134Q9H6E4 229 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 CMC2Q9NRP2 79 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 GID8Q9NWU2 228 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 GTF2A1LQ9UNN4 478 aa11.43□□□□□ -0.58
U2AF1-211ENST00000486519 V9GYY5 206 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-211ENST00000486519 FUOMA2VDF0 154 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 RIIAD1A6NNX1 92 aa11.42□□□□□ -0.58
U2AF1-211ENST00000486519 BBIP1A8MTZ0 92 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms