RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PAN3Q58A45 887 aaKnown RBP21.64■■□□□ 1.06
GTF3C4-202ENST00000483873 GFI1Q99684 422 aa21.64■■□□□ 1.06
GTF3C4-202ENST00000483873 CENPOQ9BU64 300 aa21.64■■□□□ 1.06
GTF3C4-202ENST00000483873 SLITRK2Q9H156 845 aa21.64■■□□□ 1.06
GTF3C4-202ENST00000483873 BANF2Q9H503 90 aa21.64■■□□□ 1.06
GTF3C4-202ENST00000483873 NPFFO15130 113 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 OR7C1O76099 320 aaPredicted RBP21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 GTF2F2P13984 249 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 RPL5P46777 297 aaKnown RBP21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 UBE2E1P51965 193 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 UBA52P62987 128 aaKnown RBP21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 KRBOX4Q5JUW0 171 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 TMEM104Q8NE00 496 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 AIREO43918 545 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 COX7A1P24310 79 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 GPR176Q14439 515 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 TAF9Q16594 264 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 TIMM50Q3ZCQ8 353 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 GLT8D1Q68CQ7 371 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 GPR141Q7Z602 305 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 TRAPPC6BQ86SZ2 158 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 SPATA3Q8NHX4 192 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 ZDHHC16Q969W1 377 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 PRDM13Q9H4Q3 707 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 PCDHB16Q9NRJ7 776 aa21.63■■□□□ 1.05
GTF3C4-202ENST00000483873 TRAV1-2A0A0B4J238 106 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 hCG_1809904A0A1W2PP81 198 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 A0A1W2PPE2 198 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 A0A1W2PR64 198 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 A0A1W2PRV1 198 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 TRIM77I1YAP6 450 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 SAA4P35542 130 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 C1orf100Q5SVJ3 147 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 SUMF2Q8NBJ7 301 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 PLPPR1Q8TBJ4 325 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 IFT22Q9H7X7 185 aa21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 AK6Q9Y3D8 172 aaKnown RBP21.62■■□□□ 1.05
GTF3C4-202ENST00000483873 ODAMA1E959 279 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 HOXA3O43365 443 aaPredicted RBP21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 MYL9P24844 172 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 TGFBR1P36897 503 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 MPV17LQ2QL34 196 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 GDPGP1Q6ZNW5 385 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 LINC00596Q86U02 117 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 FAM46BQ96A09 425 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 FOXRED1Q96CU9 486 aaPredicted RBP21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 DPCDQ9BVM2 203 aaPredicted RBP21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 NAA50Q9GZZ1 169 aaKnown RBP21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 KCNK15Q9H427 330 aa21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 UBE2J1Q9Y385 318 aaPredicted RBP21.61■■□□□ 1.05
GTF3C4-202ENST00000483873 MEIOCA2RUB1 952 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 FUOMA2VDF0 154 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 CRTAPO75718 401 aaPredicted RBP21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 MMP23AO75900 390 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 RBP4P02753 201 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 IGHV1-8P0DP01 117 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 CD37P11049 281 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 MGMTP16455 207 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 LSM3P62310 102 aaKnown RBP21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 SLC9A3R2Q15599 337 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 ATAD3CQ5T2N8 411 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 GPR107Q5VW38 600 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 BRICD5Q6PL45 260 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 Q6YL49 198 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 SLC16A12Q6ZSM3 486 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 KCTD7Q96MP8 289 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 SELENOIQ9C0D9 397 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 HEXA-AS1Q9H8Q6 139 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 KIF25Q9UIL4 384 aa21.6■■□□□ 1.05
GTF3C4-202ENST00000483873 TRGV10A0A0A0MS01 117 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 MELTFP08582 738 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 RSBN1Q5VWQ0 802 aaPredicted RBP21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 OR10K2Q6IF99 312 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 ZFAND2BQ8WV99 257 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 C17orf50Q8WW18 174 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 CORO2AQ92828 525 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 MRPS24Q96EL2 167 aaKnown RBP21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 CYYR1Q96J86 154 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 TNFRSF19Q9NS68 423 aa21.59■■□□□ 1.05
GTF3C4-202ENST00000483873 SLC22A1O15245 554 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 CLPXO76031 633 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 HTR2CP28335 458 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 ANKRD13BQ86YJ7 626 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 FAM216AQ8WUB2 273 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 Q96M66 194 aa21.58■■□□□ 1.05
GTF3C4-202ENST00000483873 VSIG8P0DPA2 414 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 OR10A3P58181 314 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 PRAMEF5Q5TYX0 476 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 BAIAP2L2Q6UXY1 529 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 NR2C2APQ86WQ0 139 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 GHRLQ9UBU3 117 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 FAM96BQ9Y3D0 163 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 STAB1Q9NY15 2570 aa21.57■■□□□ 1.04
GTF3C4-202ENST00000483873 MEIKINA0A087WXM9 373 aa21.56■■□□□ 1.04
GTF3C4-202ENST00000483873 SMIM30A4D0T7 59 aa21.56■■□□□ 1.04
GTF3C4-202ENST00000483873 GABARAPO95166 117 aa21.56■■□□□ 1.04
GTF3C4-202ENST00000483873 MPIG6BO95866 241 aa21.56■■□□□ 1.04
GTF3C4-202ENST00000483873 RAB3BP20337 219 aa21.56■■□□□ 1.04
GTF3C4-202ENST00000483873 GDNFP39905 211 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms