RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MKRN2OSH3BPM6 223 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 EPPINO95925 133 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 IGKV1D-33P01593 117 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 IGKV1-33P01594 117 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 GTF2F2P13984 249 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 CD34P28906 385 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 CD151P48509 253 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 C1QTNF8P60827 252 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 NXNL2Q5VZ03 156 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 ANGPTL6Q8NI99 470 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 PDCD6IPQ8WUM4 868 aaKnown RBP2.97□□□□□ -1.93
VPS50-212ENST00000476413 HBEGFQ99075 208 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 TAPBPLQ9BX59 468 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 SPACA1Q9HBV2 294 aa2.97□□□□□ -1.93
VPS50-212ENST00000476413 YLPM1P49750 1951 aaKnown RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 A0A1W2PNN7 141 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 A0A1W2PRG6 482 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 GOLGA8IPA6NC78 632 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 ZNF729A6NN14 1252 aaPredicted RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 UGT2B10P36537 528 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 ZNF83P51522 516 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 SLC9A3R2Q15599 337 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 PDZD11Q5EBL8 140 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 ZNF660Q6AZW8 331 aaPredicted RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 USP50Q70EL3 339 aaPredicted RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 C10orf107Q8IVU9 208 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 ZNF738Q8NE65 137 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 MRAP2Q96G30 205 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 FAAP24Q9BTP7 215 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 FBXL15Q9H469 300 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 METTL17Q9H7H0 456 aaPredicted RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 TAS2R1Q9NYW7 299 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 TBL2Q9Y4P3 447 aaKnown RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 ICOSQ9Y6W8 199 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 URGCP-MRPS24S4R325 110 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 POLR3AO14802 1390 aaPredicted RBP2.96□□□□□ -1.94
VPS50-212ENST00000476413 NID2Q14112 1375 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 KIAA0232Q92628 1395 aa2.96□□□□□ -1.94
VPS50-212ENST00000476413 IGHV1-45A0A0A0MS14 117 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 TMEM250H0YL14 139 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 I3L4J1 428 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 SULT1C2O00338 296 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 SCN2BO60939 215 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 HLA-AP01891 365 aaKnown RBP2.95□□□□□ -1.94
VPS50-212ENST00000476413 LIMS3P0CW19 117 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 LIMS4P0CW20 117 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 SPNP16150 400 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 KLF3P57682 345 aaPredicted RBP2.95□□□□□ -1.94
VPS50-212ENST00000476413 ANGPT1Q15389 498 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 SYCP1Q15431 976 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 GOLGA7BQ2TAP0 167 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 TMEM249Q2WGJ8 235 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 ELP2Q6IA86 826 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 FAM19A3Q7Z5A8 133 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 RNASEH2CQ8TDP1 164 aaKnown RBP2.95□□□□□ -1.94
VPS50-212ENST00000476413 CCDC127Q96BQ5 260 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 PRSS27Q9BQR3 290 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 BBS2Q9BXC9 721 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 DSN1Q9H410 356 aa2.95□□□□□ -1.94
VPS50-212ENST00000476413 TRAV8-2A0A0B4J237 113 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 ERICH2A1L162 156 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 K7ERS5 55 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 KLHL2O95198 593 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 GABRA1P14867 456 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 PSMB9P28065 219 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 RAB25P57735 213 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 BIKQ13323 160 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 PMS2P3Q13401 168 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 RBM48Q5RL73 367 aaKnown RBP2.94□□□□□ -1.94
VPS50-212ENST00000476413 CLEC6AQ6EIG7 209 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 LAIR2Q6ISS4 152 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 COMTD1Q86VU5 262 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 FAM210AQ96ND0 272 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 TSSK6Q9BXA6 273 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 BTRCQ9Y297 605 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 GMEB1Q9Y692 573 aa2.94□□□□□ -1.94
VPS50-212ENST00000476413 PIK3R4Q99570 1358 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 SMLR1H3BR10 107 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 SNAP29O95721 258 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 KDELR2P33947 212 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 FOXA1P55317 472 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 RHOAP61586 193 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 BAMBIQ13145 260 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 CASP8Q14790 479 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 RPRMLQ8N4K4 120 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 CASTOR1Q8WTX7 329 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 DDIT4LQ96D03 193 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 B9D2Q9BPU9 175 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 MED10Q9BTT4 135 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 EBPLQ9BY08 206 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 GABARAPL1Q9H0R8 117 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 OR51E2Q9H255 320 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 SCML1Q9UN30 329 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 POMPQ9Y244 141 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 TRAPPC1Q9Y5R8 145 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 ARAP3Q8WWN8 1544 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms