RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 CLHC1Q8NHS4 586 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 RNASE11Q8TAA1 199 aaKnown RBP0.82□□□□□ -2.28
RBM39-228ENST00000471635 VAT1Q99536 393 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 NCOR1P1Q9H4R4 102 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 ANKHQ9HCJ1 492 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 CCL26Q9Y258 94 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 LINC00588Q9Y4M8 146 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 URGCP-MRPS24S4R325 110 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 HSPE1-MOB4S4R3N1 261 aa0.82□□□□□ -2.28
RBM39-228ENST00000471635 POLR3AO14802 1390 aaPredicted RBP0.82□□□□□ -2.28
RBM39-228ENST00000471635 MALRD1Q5VYJ5 2156 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 LCTP09848 1927 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 KIF27Q86VH2 1401 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 OTOFQ9HC10 1997 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 TRAV8-3A0A0A6YYJ7 113 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 PGPA6NDG6 321 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 M0QXV9 152 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 RFXANKO14593 260 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 PRMT5O14744 637 aaPredicted RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 POP7O75817 140 aaKnown RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 S1PR2O95136 353 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 SOX14O95416 240 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 CRYGCP07315 174 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 PSKH1P11801 424 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 PSMB9P28065 219 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 ELK4P28324 431 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 EVI2BP34910 448 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 ARR3P36575 388 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 ATP5J2P56134 94 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 OR11G2Q8NGC1 345 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 OR5C1Q8NGR4 320 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 OR4K13Q8NH42 304 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 OR4A5Q8NH83 315 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 MFSD8Q8NHS3 518 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 CACNG8Q8WXS5 425 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 CMBLQ96DG6 245 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 CPB2Q96IY4 423 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 ZNF396Q96N95 335 aaPredicted RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 SLC25A31Q9H0C2 315 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 GAL3ST2Q9H3Q3 398 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 LRRC19Q9H756 370 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 TDRD3Q9H7E2 651 aaKnown RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 SDHAF2Q9NX18 166 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 DNAJC27Q9NZQ0 273 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 RABL2AQ9UBK7 228 aaPredicted RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 SLC23A2Q9UGH3 650 aa0.81□□□□□ -2.28
RBM39-228ENST00000471635 RPUSD1Q9UJJ7 312 aaKnown RBP0.81□□□□□ -2.28
RBM39-228ENST00000471635 STRCP1A6NGW2 1772 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 CEP170Q5SW79 1584 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 YLPM1P49750 1951 aaKnown RBP0.8□□□□□ -2.28
RBM39-228ENST00000471635 TCF21O43680 179 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 CRTAPO75718 401 aaPredicted RBP0.8□□□□□ -2.28
RBM39-228ENST00000471635 ZNF189O75820 626 aaPredicted RBP0.8□□□□□ -2.28
RBM39-228ENST00000471635 CA2P00918 260 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 OR12D1P0DN82 309 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 GCLMP48507 274 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 MMDQ15546 238 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 GOLGA7BQ2TAP0 167 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 ACTL10Q5JWF8 245 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 NXNL2Q5VZ03 156 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 NIPAL1Q6NVV3 410 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 ZIC4Q8N9L1 334 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 FER1L6-AS1Q8NA97 138 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 DRAXINQ8NBI3 349 aaPredicted RBP0.8□□□□□ -2.28
RBM39-228ENST00000471635 OR6N2Q8NGY6 317 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 DOK4Q8TEW6 326 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 REEP6Q96HR9 211 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 BIRC8Q96P09 236 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 TXNDC17Q9BRA2 123 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 ARL6Q9H0F7 186 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 VAPAQ9P0L0 249 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 PHLDA3Q9Y5J5 127 aa0.8□□□□□ -2.28
RBM39-228ENST00000471635 TRPM6Q9BX84 2022 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 COL4A2P08572 1712 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 COL18A1P39060 1754 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 IGHV2-26A0A0B4J1V2 119 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 ODF3BA8MYP8 253 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 F5H5T6 163 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 KLRC4-KLRK1H3BQV0 150 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 EEF1E1O43324 174 aaKnown RBP0.79□□□□□ -2.28
RBM39-228ENST00000471635 ENSAO43768 121 aaKnown RBP0.79□□□□□ -2.28
RBM39-228ENST00000471635 SC5DO75845 299 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 GYPCP04921 128 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 GUSBP08236 651 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 BLVRBP30043 206 aaPredicted RBP0.79□□□□□ -2.28
RBM39-228ENST00000471635 ZNF140P52738 457 aaPredicted RBP0.79□□□□□ -2.28
RBM39-228ENST00000471635 RAB38P57729 211 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 STX4Q12846 297 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 APOFQ13790 326 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 HES1Q14469 280 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 CEACAM21Q3KPI0 293 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 NKAIN1Q4KMZ8 207 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 SPIN4Q56A73 249 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 RESP18Q5W5W9 173 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 ZNF767PQ75MW2 155 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 KRTCAP2Q8N6L1 136 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 ZNF321PQ8N8H1 164 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 OR10P1Q8NGE3 313 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 KCTD4Q8WVF5 259 aa0.79□□□□□ -2.28
RBM39-228ENST00000471635 HIST1H2BAQ96A08 127 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms