RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
SMC4-212ENST00000470240 KIRREL1Q96J84 757 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 C18orf12Q96KH6 178 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 PBDC1Q9BVG4 233 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 RTL8AQ9BWD3 113 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 PKIBQ9C010 78 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 CDH20Q9HBT6 801 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 PARP11Q9NR21 331 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 CYTL1Q9NRR1 136 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 FBXL17Q9UF56 701 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 POLDIP2Q9Y2S7 368 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 STRAPQ9Y3F4 350 aaKnown RBP6.87□□□□□ -1.31
SMC4-212ENST00000470240 ZNF175Q9Y473 711 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 NCKAP5O14513 1909 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 COL27A1Q8IZC6 1860 aaPredicted RBP6.87□□□□□ -1.31
SMC4-212ENST00000470240 KMT2EQ8IZD2 1858 aa6.87□□□□□ -1.31
SMC4-212ENST00000470240 FAM221AA4D161 298 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 MSGN1A6NI15 193 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 CD300LBA8K4G0 201 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 DEGS1O15121 323 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 MPPED1O15442 326 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 TSPAN15O95858 294 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 SEC11BP0C7V7 166 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 CD59P13987 128 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 PRKACAP17612 351 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 GNRHRP30968 328 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 CAV2P51636 162 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 IL24Q13007 206 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 ZNF766Q5HY98 468 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 PXDC1Q5TGL8 231 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 TMEM268Q5VZI3 342 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 FBXW9Q5XUX1 488 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 RPL7L1Q6DKI1 246 aaKnown RBP6.86□□□□□ -1.31
SMC4-212ENST00000470240 MEX3BQ6ZN04 569 aaKnown RBP6.86□□□□□ -1.31
SMC4-212ENST00000470240 CALHM1Q8IU99 346 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 UBAC2Q8NBM4 344 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 MDS2Q8NDY4 140 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 LFNGQ8NES3 379 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 OR1K1Q8NGR3 316 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 FGFBP3Q8TAT2 258 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 SECTM1Q8WVN6 248 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 IL22RA2Q969J5 263 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 SMIM8Q96KF7 97 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 HRH4Q9H3N8 390 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 Q9N2K0 584 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 TRIOBPQ9H2D6 2365 aa6.86□□□□□ -1.31
SMC4-212ENST00000470240 SDK2Q58EX2 2172 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 MED12Q93074 2177 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 MYO7BQ6PIF6 2116 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 J3QT63 122 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 HSPA12AO43301 675 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 KCNAB3O43448 404 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 TSPAN9O75954 239 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 MBPP02686 304 aaPredicted RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 PRH1P02810 166 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 MMP9P14780 707 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 NKX2-1P43699 371 aaPredicted RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 CAMLGP49069 296 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 TMEM33P57088 247 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 RAB2AP61019 212 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 SP6Q3SY56 376 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 DHRS13Q6UX07 377 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 Q6ZRG5 221 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 GLRX5Q86SX6 157 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 FAM58AQ8N1B3 248 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 BOLLQ8N9W6 283 aaKnown RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 ZFP62Q8NB50 900 aaPredicted RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 OR4A4PQ8NGN8 299 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 OR10J5Q8NHC4 309 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 RNASE11Q8TAA1 199 aaKnown RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 OR5P3Q8WZ94 311 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 DYRK2Q92630 601 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 GMPPAQ96IJ6 420 aaPredicted RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 POM121L2Q96KW2 1035 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 DMRTA2Q96SC8 542 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 AIFM2Q9BRQ8 373 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 MS4A7Q9GZW8 240 aaPredicted RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 TMEM222Q9H0R3 208 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 UQCC1Q9NVA1 299 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 RCC2Q9P258 522 aaKnown RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 NDRG3Q9UGV2 375 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 RCL1Q9Y2P8 373 aaKnown RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
SMC4-212ENST00000470240 KPTNQ9Y664 436 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 ATP23Q9Y6H3 246 aa6.85□□□□□ -1.31
SMC4-212ENST00000470240 TNRC6AQ8NDV7 1962 aaKnown RBP6.84□□□□□ -1.31
SMC4-212ENST00000470240 PMS2P1A4D2B8 440 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 RNF212BA8MTL3 300 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 H0Y980 276 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 RNASEK-C17orf49H0YIS7 233 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 H7C2Y5 167 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 TRIM77I1YAP6 450 aa6.84□□□□□ -1.31
SMC4-212ENST00000470240 ABCD4O14678 606 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms