RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ACTR3BQ9P1U1 418 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 GNGT2O14610 69 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 OVOL1O14753 267 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGHG4P01861 327 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 REG1BP48304 166 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 OR2T10Q8NGZ9 312 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 DCUN1D4Q92564 292 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 RFT1Q96AA3 541 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 CALYQ9NYX4 217 aa14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 MRM2Q9UI43 246 aaKnown RBP14.76□□□□□ -0.05
NCKIPSD-209ENST00000470006 MEIKINA0A087WXM9 373 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 A0A1W2PPE3 182 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 HSPB6O14558 160 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 HSD17B6O14756 317 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 DEGS1O15121 323 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 CST1P01037 141 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 GAPDHP04406 335 aaKnown RBP14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 KRT8P05787 483 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 C21orf33P30042 268 aaPredicted RBP14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 PDZK1IP1Q13113 114 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 Q8N9W7 124 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 DNAAF1Q8NEP3 725 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 OR6Q1Q8NGQ2 317 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 RFESDQ8TAC1 157 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 KCTD7Q96MP8 289 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 GHITMQ9H3K2 345 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 GNB4Q9HAV0 340 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 NEK6Q9HC98 313 aa14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 H2AFY2Q9P0M6 372 aaPredicted RBP14.75□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGHV1-3A0A0C4DH29 117 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 TCRBV5S2A0A599 114 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 SLC33A1O00400 549 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 CSN2P05814 226 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 PRKACBP22694 351 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 PSMB8P28062 276 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 VEGFCP49767 419 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 GK3PQ14409 553 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 CHST4Q8NCG5 386 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 PP6455Q8WZ26 134 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 MNTQ99583 582 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 ELAC2Q9BQ52 826 aaKnown RBP14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 VSIG4Q9Y279 399 aa14.74□□□□□ -0.05
NCKIPSD-209ENST00000470006 SOX6P35712 828 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 GNB1P62873 340 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 CFHR3Q02985 330 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 EBI3Q14213 229 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 SPATS1Q496A3 300 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 ASPHD1Q5U4P2 390 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 FAM53AQ6NSI3 398 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 LHFPL2Q6ZUX7 228 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 DHFR2Q86XF0 187 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 CATSPERDQ86XM0 798 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 CCDC54Q8NEL0 328 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 OR13A1Q8NGR1 328 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 UBE2E2Q96LR5 201 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 S1PR3Q99500 378 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 TBX5Q99593 518 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 HSPB9Q9BQS6 159 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 OSBPL10Q9BXB5 764 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 COMMD4Q9H0A8 199 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 KIF25Q9UIL4 384 aa14.73□□□□□ -0.05
NCKIPSD-209ENST00000470006 IL1AP01583 271 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 OR5H8P0DN80 308 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGHV4-30-4P0DP06 118 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 ATF1P18846 271 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 ISL1P61371 349 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 Q6P435 159 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 BCDIN3DQ7Z5W3 292 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 TMEM179BQ7Z7N9 219 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 OR5D18Q8NGL1 313 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 ST6GALNAC6Q969X2 333 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 SLC25A19Q9HC21 320 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 CLN6Q9NWW5 311 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 NDE1Q9NXR1 346 aa14.72□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGKV1-9A0A0C4DH69 117 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGKV1-12A0A0C4DH73 117 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 LOC107986453A0A1B0GWG9 222 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 I3L521 148 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 IGKV1D-12P01611 117 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF20P17024 532 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 MNAT1P51948 309 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZP1P60852 638 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF816Q0VGE8 651 aaPredicted RBP14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 IZUMO1Q8IYV9 350 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 RDH10Q8IZV5 341 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 Q8N6K4 173 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF491Q8N8L2 437 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 MRGPRDQ8TDS7 321 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 C10orf35Q96D05 121 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 OPALINQ96PE5 141 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 SPACA5Q96QH8 159 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 SPATA25Q9BR10 227 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 BARHL1Q9BZE3 327 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 KLK15Q9H2R5 256 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 ADGRL4Q9HBW9 690 aa14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 CHCHD3Q9NX63 227 aaKnown RBP14.71□□□□□ -0.05
NCKIPSD-209ENST00000470006 KDM4BO94953 1096 aa14.7□□□□□ -0.06
NCKIPSD-209ENST00000470006 MOSP00540 346 aa14.7□□□□□ -0.06
NCKIPSD-209ENST00000470006 IFNA6P05013 189 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms