RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 ZNF273Q14593 569 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 COQ2Q96H96 371 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 TBX15Q96SF7 602 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 URM1Q9BTM9 101 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 BARHL1Q9BZE3 327 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 NAA50Q9GZZ1 169 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 LPAR5Q9H1C0 372 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 DAPK2Q9UIK4 370 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 PEX16Q9Y5Y5 336 aa11.89□□□□□ -0.51
DNMT3A-208ENST00000466601 MEX3AA1L020 520 aaKnown RBP11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 MCRIP1C9JLW8 97 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 GABARAPO95166 117 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 CCL3L1P16619 93 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 SRD5A1P18405 259 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 FUT3P21217 361 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 RPS19P39019 145 aaKnown RBP11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 VBP1P61758 197 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 NCS1P62166 190 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 KLF17Q5JT82 389 aaPredicted RBP11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 RSBN1Q5VWQ0 802 aaPredicted RBP11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 RAB12Q6IQ22 244 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 VMO1Q7Z5L0 202 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 Q8N7P7 452 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 PLPPR1Q8TBJ4 325 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
DNMT3A-208ENST00000466601 TRGV10A0A0A0MS01 117 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 ODAMA1E959 279 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 PDCD6O75340 191 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 FSHBP01225 129 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 IL1AP01583 271 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 GLAP06280 429 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 BLVRBP30043 206 aaPredicted RBP11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 SERPINB10P48595 397 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 PAX5Q02548 391 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 PLA2G7Q13093 441 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 TRAPPC6BQ86SZ2 158 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 FAM89BQ8N5H3 189 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 CORO2AQ92828 525 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 ZNF714Q96N38 554 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 NCOR1P1Q9H4R4 102 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 SIRT7Q9NRC8 400 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 UBE2J1Q9Y385 318 aaPredicted RBP11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 C2CD3Q4AC94 2353 aa11.87□□□□□ -0.51
DNMT3A-208ENST00000466601 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 IGHV3OR16-10A0A075B7F0 116 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 A0A0A6YYD4 124 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 TRAV40A0A0B4J280 105 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 A0A1W2PR64 198 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 SOCS1O15524 211 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 FAM157CP0CG43 387 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 RAB6AP20340 208 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 PRTN3P24158 256 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 CHATP28329 748 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 DLX6P56179 175 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 CTF1Q16619 201 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 NKAPLQ5M9Q1 402 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 IDNKQ5T6J7 187 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 SLC35E4Q6ICL7 350 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 CLVS1Q8IUQ0 354 aaPredicted RBP11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 CROCCP3Q8IVE0 287 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 LHX4Q969G2 390 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 PTX4Q96A99 478 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 ETAA1Q9NY74 926 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 KIF25Q9UIL4 384 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 NUP50Q9UKX7 468 aa11.86□□□□□ -0.51
DNMT3A-208ENST00000466601 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 TMEM30CPA0ZSE6 113 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 UBE2QL1A1L167 161 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 TMEM127O75204 238 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 PAHP00439 452 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 VEGFCP49767 419 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 EFNB2P52799 333 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 DLX1P56177 255 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 FAM189A2Q15884 450 aa11.85□□□□□ -0.51
DNMT3A-208ENST00000466601 GPR157Q5UAW9 335 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms