RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ODAMA1E959 279 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 TMEM14DPA8MWL7 114 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 FSHBP01225 129 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 GLAP06280 429 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 ZNF728P0DKX0 622 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 FUT3P21217 361 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 SDC2P34741 201 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 ERVFRD-1P60508 538 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 RPS27AP62979 156 aaKnown RBP16.28■□□□□ 0.2
COL9A3-204ENST00000463487 PAX5Q02548 391 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 RAB12Q6IQ22 244 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 METAP1DQ6UB28 335 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-204ENST00000463487 BPIFB2Q8N4F0 458 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 ZNF565Q8N9K5 539 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 OR51D1Q8NGF3 324 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 TBX15Q96SF7 602 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 NCOR1P1Q9H4R4 102 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 UNKLQ9H9P5 680 aaKnown RBP16.28■□□□□ 0.2
COL9A3-204ENST00000463487 FBLN5Q9UBX5 448 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 PEX16Q9Y5Y5 336 aa16.28■□□□□ 0.2
COL9A3-204ENST00000463487 NAV3Q8IVL0 2385 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 PDCD6O75340 191 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 PRTN3P24158 256 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 CLDN12P56749 244 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 ZNF273Q14593 569 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 GPR141Q7Z602 305 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 CROCCP3Q8IVE0 287 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 TPRX1Q8N7U7 411 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 LHX4Q969G2 390 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 FUNDC2Q9BWH2 189 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 TM2D1Q9BX74 207 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 HEXA-AS1Q9H8Q6 139 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 LIN7BQ9HAP6 207 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 SIRT7Q9NRC8 400 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 ING3Q9NXR8 418 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 TAS2R3Q9NYW6 316 aa16.27■□□□□ 0.2
COL9A3-204ENST00000463487 RCC2Q9P258 522 aaKnown RBP16.27■□□□□ 0.2
COL9A3-204ENST00000463487 MEIKINA0A087WXM9 373 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 TMEM30CPA0ZSE6 113 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 TMEM127O75204 238 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 CA11O75493 328 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 CCL3L1P16619 93 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 GLIPR1P48060 266 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 QRFPP83859 136 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 MXD1Q05195 221 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 UNC119Q13432 240 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 C2orf76Q3KRA6 126 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 SLC35E4Q6ICL7 350 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 OR10K2Q6IF99 312 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 RAB22AQ9UL26 194 aa16.26■□□□□ 0.19
COL9A3-204ENST00000463487 HOXB4P17483 251 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-204ENST00000463487 KLF17Q5JT82 389 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-204ENST00000463487 NKAPLQ5M9Q1 402 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 SFXN4Q6P4A7 337 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 RBMS3Q6XE24 437 aaKnown RBP16.25■□□□□ 0.19
COL9A3-204ENST00000463487 Q8N7P7 452 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 OR56B1Q8NGI3 324 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 ZNF418Q8TF45 676 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-204ENST00000463487 CORO2AQ92828 525 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 COQ2Q96H96 371 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 SUCNR1Q9BXA5 334 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 OCEL1Q9H607 264 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 ETAA1Q9NY74 926 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 DAPK2Q9UIK4 370 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 SCOCQ9UIL1 159 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 KIF25Q9UIL4 384 aa16.25■□□□□ 0.19
COL9A3-204ENST00000463487 IGHV1-69DA0A0B4J2H0 117 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 SMIM30A4D0T7 59 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 METTL21EPA6NDL7 271 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 ZNF729A6NN14 1252 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-204ENST00000463487 C17orf98A8MV24 154 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 CLPXO76031 633 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 IGHV1-69P01742 117 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 IGHV4-38-2P0DP08 117 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 RAB6AP20340 208 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 GLP1RP43220 463 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 LSM3P62310 102 aaKnown RBP16.24■□□□□ 0.19
COL9A3-204ENST00000463487 RSBN1Q5VWQ0 802 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-204ENST00000463487 PTX4Q96A99 478 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 KCNK15Q9H427 330 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 RAB9BQ9NP90 201 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 PLEKHJ1Q9NW61 149 aa16.24■□□□□ 0.19
COL9A3-204ENST00000463487 IGHV3OR16-10A0A075B7F0 116 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 CENPVL3A0A0U1RRI6 287 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 IL1AP01583 271 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 TFAP2AP05549 437 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 BLVRBP30043 206 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-204ENST00000463487 UBE2E1P51965 193 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 SCAND1P57086 179 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 OR52W1Q6IF63 320 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 C9orf139Q6ZV77 190 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 OR13D1Q8NGV5 346 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 PLPPR1Q8TBJ4 325 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 LPAR5Q9H1C0 372 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 RNF167Q9H6Y7 350 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 ZNF581Q9P0T4 197 aa16.23■□□□□ 0.19
COL9A3-204ENST00000463487 A0A0A6YYJ9 748 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 TMEM272A0A1B0GTI8 110 aa16.22■□□□□ 0.19
COL9A3-204ENST00000463487 MEX3AA1L020 520 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms