RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SLC16A12Q6ZSM3 486 aa11.75□□□□□ -0.53
APP-211ENST00000462267 ZNF565Q8N9K5 539 aa11.75□□□□□ -0.53
APP-211ENST00000462267 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
APP-211ENST00000462267 LEAP2Q969E1 77 aa11.75□□□□□ -0.53
APP-211ENST00000462267 COQ2Q96H96 371 aa11.75□□□□□ -0.53
APP-211ENST00000462267 PLEKHA1Q9HB21 404 aa11.75□□□□□ -0.53
APP-211ENST00000462267 HMG20AQ9NP66 347 aa11.75□□□□□ -0.53
APP-211ENST00000462267 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
APP-211ENST00000462267 ACTR3BQ9P1U1 418 aa11.75□□□□□ -0.53
APP-211ENST00000462267 MAGEL2Q9UJ55 1249 aa11.75□□□□□ -0.53
APP-211ENST00000462267 OR52A1Q9UKL2 312 aa11.75□□□□□ -0.53
APP-211ENST00000462267 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
APP-211ENST00000462267 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
APP-211ENST00000462267 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
APP-211ENST00000462267 PRR32B1ATL7 298 aa11.74□□□□□ -0.53
APP-211ENST00000462267 MOSP00540 346 aa11.74□□□□□ -0.53
APP-211ENST00000462267 CALCBP10092 127 aa11.74□□□□□ -0.53
APP-211ENST00000462267 CCL1P22362 96 aa11.74□□□□□ -0.53
APP-211ENST00000462267 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
APP-211ENST00000462267 PITPNAQ00169 270 aa11.74□□□□□ -0.53
APP-211ENST00000462267 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
APP-211ENST00000462267 CPOQ8IVL8 374 aa11.74□□□□□ -0.53
APP-211ENST00000462267 GATAD1Q8WUU5 269 aa11.74□□□□□ -0.53
APP-211ENST00000462267 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
APP-211ENST00000462267 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
APP-211ENST00000462267 IKZF2Q9UKS7 526 aa11.74□□□□□ -0.53
APP-211ENST00000462267 GSTK1Q9Y2Q3 226 aa11.74□□□□□ -0.53
APP-211ENST00000462267 R4GMQ9 66 aa11.74□□□□□ -0.53
APP-211ENST00000462267 H3BN98 237 aa11.73□□□□□ -0.53
APP-211ENST00000462267 SERPINA3P01011 423 aa11.73□□□□□ -0.53
APP-211ENST00000462267 IGLV1-40P01703 118 aa11.73□□□□□ -0.53
APP-211ENST00000462267 SLC2A5P22732 501 aa11.73□□□□□ -0.53
APP-211ENST00000462267 RBP2P50120 134 aa11.73□□□□□ -0.53
APP-211ENST00000462267 RAB9AP51151 201 aa11.73□□□□□ -0.53
APP-211ENST00000462267 GALEQ14376 348 aa11.73□□□□□ -0.53
APP-211ENST00000462267 MICAQ29983 383 aa11.73□□□□□ -0.53
APP-211ENST00000462267 CHST4Q8NCG5 386 aa11.73□□□□□ -0.53
APP-211ENST00000462267 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
APP-211ENST00000462267 NSMCE2Q96MF7 247 aa11.73□□□□□ -0.53
APP-211ENST00000462267 OSBPL10Q9BXB5 764 aa11.73□□□□□ -0.53
APP-211ENST00000462267 CHST5Q9GZS9 411 aa11.73□□□□□ -0.53
APP-211ENST00000462267 TUBA4BQ9H853 241 aa11.73□□□□□ -0.53
APP-211ENST00000462267 ING3Q9NXR8 418 aa11.73□□□□□ -0.53
APP-211ENST00000462267 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
APP-211ENST00000462267 KIAA1456Q9P272 454 aa11.73□□□□□ -0.53
APP-211ENST00000462267 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
APP-211ENST00000462267 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
APP-211ENST00000462267 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
APP-211ENST00000462267 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
APP-211ENST00000462267 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
APP-211ENST00000462267 IL1AP01583 271 aa11.72□□□□□ -0.53
APP-211ENST00000462267 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
APP-211ENST00000462267 HMGN1P05114 100 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ZNF44P15621 663 aa11.72□□□□□ -0.53
APP-211ENST00000462267 CD1BP29016 333 aa11.72□□□□□ -0.53
APP-211ENST00000462267 REG1BP48304 166 aa11.72□□□□□ -0.53
APP-211ENST00000462267 GNG10P50151 68 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ATP1B3P54709 279 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ACTR3P61158 418 aa11.72□□□□□ -0.53
APP-211ENST00000462267 RNLSQ5VYX0 342 aa11.72□□□□□ -0.53
APP-211ENST00000462267 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
APP-211ENST00000462267 COMMD4Q9H0A8 199 aa11.72□□□□□ -0.53
APP-211ENST00000462267 TOLLIPQ9H0E2 274 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ALX4Q9H161 411 aaPredicted RBP11.72□□□□□ -0.53
APP-211ENST00000462267 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
APP-211ENST00000462267 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
APP-211ENST00000462267 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
APP-211ENST00000462267 TPSG1Q9NRR2 321 aa11.72□□□□□ -0.53
APP-211ENST00000462267 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
APP-211ENST00000462267 COPS3Q9UNS2 423 aa11.72□□□□□ -0.53
APP-211ENST00000462267 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.53
APP-211ENST00000462267 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.53
APP-211ENST00000462267 GLP1RP43220 463 aa11.71□□□□□ -0.53
APP-211ENST00000462267 SCN1BQ07699 218 aa11.71□□□□□ -0.53
APP-211ENST00000462267 PPP1R8Q12972 351 aaKnown RBP11.71□□□□□ -0.53
APP-211ENST00000462267 ATXN7L3Q14CW9 347 aaPredicted RBP11.71□□□□□ -0.53
APP-211ENST00000462267 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
APP-211ENST00000462267 TMEM104Q8NE00 496 aa11.71□□□□□ -0.53
APP-211ENST00000462267 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.53
APP-211ENST00000462267 OR10A7Q8NGE5 316 aa11.71□□□□□ -0.53
APP-211ENST00000462267 MNTQ99583 582 aa11.71□□□□□ -0.53
APP-211ENST00000462267 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.53
APP-211ENST00000462267 RETNQ9HD89 108 aa11.71□□□□□ -0.53
APP-211ENST00000462267 MRM2Q9UI43 246 aaKnown RBP11.71□□□□□ -0.53
APP-211ENST00000462267 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.53
APP-211ENST00000462267 KMT2AQ03164 3969 aa11.71□□□□□ -0.54
APP-211ENST00000462267 HMGB1P1B2RPK0 211 aaPredicted RBP11.7□□□□□ -0.54
APP-211ENST00000462267 G3V318 75 aa11.7□□□□□ -0.54
APP-211ENST00000462267 SLC33A1O00400 549 aaPredicted RBP11.7□□□□□ -0.54
APP-211ENST00000462267 ARPC2O15144 300 aa11.7□□□□□ -0.54
APP-211ENST00000462267 SYT7O43581 403 aa11.7□□□□□ -0.54
APP-211ENST00000462267 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
APP-211ENST00000462267 HSD17B1P14061 328 aa11.7□□□□□ -0.54
APP-211ENST00000462267 F2RL1P55085 397 aa11.7□□□□□ -0.54
APP-211ENST00000462267 MTCP1P56278 107 aa11.7□□□□□ -0.54
APP-211ENST00000462267 APOFQ13790 326 aa11.7□□□□□ -0.54
APP-211ENST00000462267 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
APP-211ENST00000462267 Q6P435 159 aa11.7□□□□□ -0.54
APP-211ENST00000462267 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms