RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LSM3P62310 102 aaKnown RBP18.5■□□□□ 0.55
C9orf3-209ENST00000460573 ARF6P62330 175 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 MXD1Q05195 221 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 RBM39Q14498 530 aaKnown RBP18.5■□□□□ 0.55
C9orf3-209ENST00000460573 EDDM3AQ14507 147 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 TMEM200BQ69YZ2 307 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 OR10K2Q6IF99 312 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 SFXN4Q6P4A7 337 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 OR4M1Q8NGD0 313 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 NANPQ8TBE9 248 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 WDFY2Q96P53 400 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 LIN7BQ9HAP6 207 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 RCC2Q9P258 522 aaKnown RBP18.5■□□□□ 0.55
C9orf3-209ENST00000460573 ONECUT1Q9UBC0 465 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 RAB22AQ9UL26 194 aa18.5■□□□□ 0.55
C9orf3-209ENST00000460573 LDLRAD4O15165 306 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 GABARAPO95166 117 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 IL1AP01583 271 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 FUT3P21217 361 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 C1orf229Q6ZS94 237 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-209ENST00000460573 PTX4Q96A99 478 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 UPRTQ96BW1 309 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 SIRPDQ9H106 197 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 LINC00312Q9Y6C7 94 aa18.49■□□□□ 0.55
C9orf3-209ENST00000460573 hCG_1809904A0A1W2PP81 198 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 A0A1W2PPE2 198 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 A0A1W2PR64 198 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 A0A1W2PRV1 198 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 MCRIP1C9JLW8 97 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 MMP9P14780 707 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 AESQ08117 197 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 KRBOX4Q5JUW0 171 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 GPR107Q5VW38 600 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 SLC16A12Q6ZSM3 486 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 BPIFB2Q8N4F0 458 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 LPAR5Q9H1C0 372 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 KCNK15Q9H427 330 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 DAPK2Q9UIK4 370 aa18.48■□□□□ 0.55
C9orf3-209ENST00000460573 ANK3Q12955 4377 aaKnown RBP18.47■□□□□ 0.55
C9orf3-209ENST00000460573 COL6A5A8TX70 2615 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 TMEM272A0A1B0GTI8 110 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 SMIM30A4D0T7 59 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 PDCD6O75340 191 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 CLEC2LP0C7M8 214 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 SLC2A2P11168 524 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-209ENST00000460573 RAB6AP20340 208 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 SCAND1P57086 179 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 SCGB2A2Q13296 93 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 ATXN7L3Q14CW9 347 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-209ENST00000460573 RAB12Q6IQ22 244 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 FAM89BQ8N5H3 189 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 CORO2AQ92828 525 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 NEDD4LQ96PU5 975 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 UBE2J1Q9Y385 318 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-209ENST00000460573 PEX16Q9Y5Y5 336 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 WNK2Q9Y3S1 2297 aa18.47■□□□□ 0.55
C9orf3-209ENST00000460573 TRGV10A0A0A0MS01 117 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 ODAMA1E959 279 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 HSPB6O14558 160 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 CA11O75493 328 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 RBP4P02753 201 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 TGFBR1P36897 503 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 RPS19P39019 145 aaKnown RBP18.46■□□□□ 0.55
C9orf3-209ENST00000460573 GLIPR1P48060 266 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 VBP1P61758 197 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 SIGIRRQ6IA17 410 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 SLC35E4Q6ICL7 350 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 TPRX1Q8N7U7 411 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 NEK7Q8TDX7 302 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 DGCR14Q96DF8 476 aaKnown RBP18.46■□□□□ 0.55
C9orf3-209ENST00000460573 COQ2Q96H96 371 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 PCGF1Q9BSM1 259 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 METTL8Q9H825 291 aaKnown RBP18.46■□□□□ 0.55
C9orf3-209ENST00000460573 UNKLQ9H9P5 680 aaKnown RBP18.46■□□□□ 0.55
C9orf3-209ENST00000460573 OR6C3Q9NZP0 311 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 ZNF581Q9P0T4 197 aa18.46■□□□□ 0.55
C9orf3-209ENST00000460573 FSHBP01225 129 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF728P0DKX0 622 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 SERPINB10P48595 397 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 NCS1P62166 190 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF273Q14593 569 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 CTF1Q16619 201 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 RSBN1Q5VWQ0 802 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-209ENST00000460573 METAP1DQ6UB28 335 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-209ENST00000460573 Q8N7P7 452 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF565Q8N9K5 539 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 OR56B1Q8NGI3 324 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 ZNF714Q96N38 554 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 TBX15Q96SF7 602 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 BCL7BQ9BQE9 202 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 NICN1Q9BSH3 213 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 TAS2R3Q9NYW6 316 aa18.45■□□□□ 0.54
C9orf3-209ENST00000460573 METTL21EPA6NDL7 271 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 C17orf98A8MV24 154 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 TCF21O43680 179 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 PRTN3P24158 256 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 CHATP28329 748 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 BLVRBP30043 206 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-209ENST00000460573 BPIFB3P59826 476 aa18.44■□□□□ 0.54
C9orf3-209ENST00000460573 IDNKQ5T6J7 187 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms