RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 OR6M1Q8NGM8 313 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 CORO2AQ92828 525 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 COQ2Q96H96 371 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 NR1H4Q96RI1 486 aaPredicted RBP6.95□□□□□ -1.3
SP140-207ENST00000456542 MDFIQ99750 246 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 BARHL1Q9BZE3 327 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 CST11Q9H112 138 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 GAL3ST2Q9H3Q3 398 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 SPACA1Q9HBV2 294 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 ESM1Q9NQ30 184 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 TAS2R3Q9NYW6 316 aa6.95□□□□□ -1.3
SP140-207ENST00000456542 COL6A5A8TX70 2615 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 ODAMA1E959 279 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 DNAJC9-AS1A6NH13 148 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 H3BUI4 141 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 SLC17A2O00624 439 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 SLC22A1O15245 554 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 CLPXO76031 633 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 TNFAIP8O95379 198 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 FBP1P09467 338 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 IGHV1-8P0DP01 117 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 CALRP27797 417 aaKnown RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 PSMB9P28065 219 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 HTR2CP28335 458 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 SAA4P35542 130 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 RANBP1P43487 201 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 GLIPR1P48060 266 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 PSMD7P51665 324 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 DLX1P56177 255 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 BAMBIQ13145 260 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 KLRD1Q13241 179 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 ATXN7L3Q14CW9 347 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 TAF9Q16594 264 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 KRBOX4Q5JUW0 171 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 SYT6Q5T7P8 510 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 RSBN1Q5VWQ0 802 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 Q6YL49 198 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 ZNF782Q6ZMW2 699 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 TRAPPC6BQ86SZ2 158 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 LDLRAD3Q86YD5 345 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 PDZD9Q8IXQ8 264 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 TMEM104Q8NE00 496 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 KCNG3Q8TAE7 436 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 FAM216AQ8WUB2 273 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 Q96M66 194 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 OR6C3Q9NZP0 311 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 RCC2Q9P258 522 aaKnown RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 SOX21Q9Y651 276 aaPredicted RBP6.94□□□□□ -1.3
SP140-207ENST00000456542 POMT1Q9Y6A1 747 aa6.94□□□□□ -1.3
SP140-207ENST00000456542 A0A0U1RQK1 487 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 MDFIC2A0A1B0GVS7 189 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 ZNF729A6NN14 1252 aaPredicted RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 HSPB6O14558 160 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 PDCD5O14737 125 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 CA11O75493 328 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 CRTAPO75718 401 aaPredicted RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 BPNT1O95861 308 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 GLAP06280 429 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 RNASE1P07998 156 aaKnown RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 MELTFP08582 738 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 VSIG8P0DPA2 414 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 CFPP27918 469 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 PRB3Q04118 309 aaPredicted RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 RBM39Q14498 530 aaKnown RBP6.93□□□□□ -1.3
SP140-207ENST00000456542 SLC9A3R2Q15599 337 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 ATAD3CQ5T2N8 411 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 ZNF626Q68DY1 528 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 OR52W1Q6IF63 320 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 OR11H6Q8NGC7 330 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 OR13D1Q8NGV5 346 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 SSMEM1Q8WWF3 244 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 SLC25A28Q96A46 364 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 GFI1Q99684 422 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 C19orf24Q9BVV8 132 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 TMEM59Q9BXS4 323 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 SELENOIQ9C0D9 397 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 BANF2Q9H503 90 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 ZNF581Q9P0T4 197 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 ZNRD1Q9P1U0 126 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 KIF25Q9UIL4 384 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 STUB1Q9UNE7 303 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 FAM96BQ9Y3D0 163 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 SESN1Q9Y6P5 492 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 V9GY05 133 aa6.93□□□□□ -1.3
SP140-207ENST00000456542 A0A087WXM4 84 aa6.92□□□□□ -1.3
SP140-207ENST00000456542 MEIKINA0A087WXM9 373 aa6.92□□□□□ -1.3
SP140-207ENST00000456542 KBTBD11-OT1A0A1B0GTJ5 212 aa6.92□□□□□ -1.3
SP140-207ENST00000456542 TMEM30CPA0ZSE6 113 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms