RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CEACAM3P40198 252 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 ST3GAL4Q11206 333 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 RIPK1Q13546 671 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 Q499Y3 187 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 C16orf82Q7Z2V1 217 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 LINC00596Q86U02 117 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 Q8N2B8 174 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 THRSPQ92748 146 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 GHSRQ92847 366 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 AKR1E2Q96JD6 320 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 NR1H4Q96RI1 486 aaPredicted RBP14.4□□□□□ -0.1
MSH6-207ENST00000456246 PRSS22Q9GZN4 317 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 CLEC2DQ9UHP7 191 aa14.4□□□□□ -0.1
MSH6-207ENST00000456246 KBTBD11-OT1A0A1B0GTJ5 212 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 LEUTXA8MZ59 168 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 TOR1AO14656 332 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 GPX5O75715 221 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 MMP23AO75900 390 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 IGLV1-47P01700 117 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 CSTBP04080 98 aaKnown RBP14.39□□□□□ -0.11
MSH6-207ENST00000456246 FSTP19883 344 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 C21orf33P30042 268 aaPredicted RBP14.39□□□□□ -0.11
MSH6-207ENST00000456246 BRS3P32247 399 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 RAB13P51153 203 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 PRRX1P54821 245 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 KLHDC1Q8N7A1 406 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 ZNF485Q8NCK3 441 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 GGHQ92820 318 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 IFT22Q9H7X7 185 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 PLCXD1Q9NUJ7 323 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
MSH6-207ENST00000456246 SIRT4Q9Y6E7 314 aaPredicted RBP14.39□□□□□ -0.11
MSH6-207ENST00000456246 TET2Q6N021 2002 aaPredicted RBP14.39□□□□□ -0.11
MSH6-207ENST00000456246 MEIKINA0A087WXM9 373 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 TRAV24A0A0B4J272 114 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 FAM90A22PA8MWA6 464 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 OOSP1A8MZH6 123 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 HSPB6O14558 160 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 MYL12BO14950 172 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 HTR3BO95264 441 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 LALBAP00709 142 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 CSF1P09603 554 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 GLP1RP43220 463 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 OR3A4PP47883 348 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 GPR176Q14439 515 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 MPV17LQ2QL34 196 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 HLA-DRB5Q30154 266 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 CCDC144NLQ6NUI1 221 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 CCBE1Q6UXH8 406 aaPredicted RBP14.38□□□□□ -0.11
MSH6-207ENST00000456246 TMEM219Q86XT9 240 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 OSR2Q8N2R0 312 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 FBLIM1Q8WUP2 373 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 CFHR4Q92496 578 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 PGLYRP3Q96LB9 341 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 PPIL3Q9H2H8 161 aaKnown RBP14.38□□□□□ -0.11
MSH6-207ENST00000456246 ZNF702PQ9H963 129 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 PSORS1C1Q9UIG5 152 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 ST3GAL6Q9Y274 331 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 VWFP04275 2813 aa14.38□□□□□ -0.11
MSH6-207ENST00000456246 MEGF11A6BM72 1044 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 CD1AP06126 327 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 IGFBP3P17936 291 aaPredicted RBP14.37□□□□□ -0.11
MSH6-207ENST00000456246 RBM11P57052 281 aaKnown RBP14.37□□□□□ -0.11
MSH6-207ENST00000456246 PIGYQ3MUY2 71 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 CDH26Q8IXH8 852 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 STX19Q8N4C7 294 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 OR10A7Q8NGE5 316 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 ZNF184Q99676 751 aaPredicted RBP14.37□□□□□ -0.11
MSH6-207ENST00000456246 DCLRE1BQ9H816 532 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 LINC00574Q9H8X3 128 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 ING3Q9NXR8 418 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 CALYQ9NYX4 217 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 KIF25Q9UIL4 384 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 ING4Q9UNL4 249 aa14.37□□□□□ -0.11
MSH6-207ENST00000456246 AMMECR1Q9Y4X0 333 aaPredicted RBP14.37□□□□□ -0.11
MSH6-207ENST00000456246 OR7C1O76099 320 aaPredicted RBP14.36□□□□□ -0.11
MSH6-207ENST00000456246 CDRT1O95170 752 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 IL1AP01583 271 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 GNAO1P09471 354 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 MNDAP41218 407 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 WNT4P56705 351 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 RPS11P62280 158 aaKnown RBP eCLIP14.36□□□□□ -0.11
MSH6-207ENST00000456246 C17orf58Q2M2W7 97 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 RSBN1Q5VWQ0 802 aaPredicted RBP14.36□□□□□ -0.11
MSH6-207ENST00000456246 SLC16A12Q6ZSM3 486 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 AHSA2Q719I0 299 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 OR13C5Q8NGS8 318 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 OR9G1Q8NH87 305 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 CAPSLQ8WWF8 208 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 DPCDQ9BVM2 203 aaPredicted RBP14.36□□□□□ -0.11
MSH6-207ENST00000456246 LIN7BQ9HAP6 207 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 ZNF286AQ9HBT8 521 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 SERTAD4Q9NUC0 356 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 FOXJ3Q9UPW0 622 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 NOTCH1P46531 2555 aa14.36□□□□□ -0.11
MSH6-207ENST00000456246 TRBV5-7A0A0A0MS05 114 aa14.35□□□□□ -0.11
MSH6-207ENST00000456246 BUB1B-PAK6H3BSN5 160 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms