RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ADAD2Q8NCV1 583 aaKnown RBP13.59□□□□□ -0.23
SNX17-204ENST00000453453 OR4S1Q8NGB4 309 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 LYPD6BQ8NI32 183 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 CASTOR1Q8WTX7 329 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 FGGYQ96C11 551 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 MALSU1Q96EH3 234 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 C2orf50Q96LR7 162 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 NGBQ9NPG2 151 aa13.59□□□□□ -0.23
SNX17-204ENST00000453453 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 DHRS7CA6NNS2 312 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 TMEM14DPA8MWL7 114 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 SFTA3P0C7M3 94 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 WNT5AP41221 380 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 AKR1C2P52895 323 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 SRSF3P84103 164 aaKnown RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 AKR1C1Q04828 323 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 SURF2Q15527 256 aaPredicted RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 OR10K2Q6IF99 312 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 ZNF529Q6P280 563 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 MYPOPQ86VE0 399 aaPredicted RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 SEMA6DQ8NFY4 1073 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 OR4D6Q8NGJ1 314 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 OR5D14Q8NGL3 314 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 RRNAD1Q96FB5 475 aaKnown RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 LYZL4Q96KX0 146 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 ADAT1Q9BUB4 502 aaKnown RBP13.58□□□□□ -0.24
SNX17-204ENST00000453453 OR51M1Q9H341 326 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 V9GYS6 101 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 RTTNQ86VV8 2226 aa13.58□□□□□ -0.24
SNX17-204ENST00000453453 C5orf63A6NC05 138 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 H0YIZ8 118 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 GATCO43716 136 aaKnown RBP13.57□□□□□ -0.24
SNX17-204ENST00000453453 CST4P01036 141 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 CSN2P05814 226 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 FCGR3AP08637 254 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 AKR1C4P17516 323 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 AGAP20933 346 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 ECI1P42126 302 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 POLR2GP62487 172 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX17-204ENST00000453453 SPOCK1Q08629 439 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 IL15RAQ13261 267 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 FAM76BQ5HYJ3 339 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 WFDC8Q8IUA0 241 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 OR51A2Q8NGJ7 313 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 OR14K1Q8NGZ2 314 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 OR4K15Q8NH41 348 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 SPSB4Q96A44 273 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 STARD10Q9Y365 291 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 C13orf42A0A1B0GVH6 325 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 FAM157AC9JC47 383 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 CRYAAP02489 173 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 S100A6P06703 90 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 TUBG1P23258 451 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 ANOS1P23352 680 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 THBS4P35443 961 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 ZNF92Q03936 586 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 UNC119Q13432 240 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 TMEM268Q5VZI3 342 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 Q6ZSR3 168 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 BCL2L14Q9BZR8 327 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 OR51B6Q9H340 312 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 FN3KRPQ9HA64 309 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX17-204ENST00000453453 TUBG2Q9NRH3 451 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 PIGLQ9Y2B2 252 aa13.57□□□□□ -0.24
SNX17-204ENST00000453453 IGHV2OR16-5A0A0B4J2B6 119 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 hCG_38984A0A1B0GV85 526 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 SSX5O60225 188 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 LMX1BO60663 402 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 SMPD2O60906 423 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 NGFP01138 241 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 UCP2P55851 309 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 PPP1CBP62140 327 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 LHFPL1Q86WI0 220 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 ZNF101Q8IZC7 436 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 ZNF808Q8N4W9 903 aaPredicted RBP13.56□□□□□ -0.24
SNX17-204ENST00000453453 MARCH1Q8TCQ1 289 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 PP6455Q8WZ26 134 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 OCSTAMPQ9BR26 566 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 CNTD2Q9H8S5 307 aa13.56□□□□□ -0.24
SNX17-204ENST00000453453 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
SNX17-204ENST00000453453 JTBO76095 146 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 CLDN14O95500 239 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 FAM3AP98173 230 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 OR8B8Q15620 311 aa13.55□□□□□ -0.24
SNX17-204ENST00000453453 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms