RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DYNC1I2Q13409 638 aaKnown RBP20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 NKAIN3Q8N8D7 197 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 COQ2Q96H96 371 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 OR5M11Q96RB7 305 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 ING3Q9NXR8 418 aa20.08■□□□□ 0.81
RAPGEF1-206ENST00000438647 TRAV24A0A0B4J272 114 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 HSPB6O14558 160 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 ATP6V1G2O95670 118 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 MAS1P04201 325 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 GTF2F2P13984 249 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 RBM11P57052 281 aaKnown RBP20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 GPR50Q13585 617 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 IRF3Q14653 427 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 SLC22A6Q4U2R8 563 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 HEPN1Q6WQI6 88 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 SGCDQ92629 289 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 MALSU1Q96EH3 234 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 CLEC7AQ9BXN2 247 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 SLITRK2Q9H156 845 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 NCOR1P1Q9H4R4 102 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 IFT22Q9H7X7 185 aa20.07■□□□□ 0.8
RAPGEF1-206ENST00000438647 IGHV2-26A0A0B4J1V2 119 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 MEGF11A6BM72 1044 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 OR7C1O76099 320 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 CRHBPP24387 322 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 CDK2P24941 298 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 PAX5Q02548 391 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 MPV17LQ2QL34 196 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 ACSM3Q53FZ2 586 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 MINOS1Q5TGZ0 78 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 LHFPL4Q7Z7J7 247 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 ZNF565Q8N9K5 539 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 OR4D6Q8NGJ1 314 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 SGMS2Q8NHU3 365 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 UFD1Q92890 307 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 RAB18Q9NP72 206 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 BLOC1S6Q9UL45 172 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 RAB26Q9ULW5 256 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 MRPS28Q9Y2Q9 187 aaKnown RBP20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 MINOS1-NBL1R4GNA1 71 aa20.06■□□□□ 0.8
RAPGEF1-206ENST00000438647 CLPSL1A2RUU4 121 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 ZNF729A6NN14 1252 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 PIN1P1O15428 100 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 OLFML2AQ68BL7 652 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 PRSS48Q7RTY5 328 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 RTN4RL2Q86UN3 420 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 MUL1Q969V5 352 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 MRPS24Q96EL2 167 aaKnown RBP20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 CNBD2Q96M20 576 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 TMED9Q9BVK6 235 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 CCDC90BQ9GZT6 254 aa20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 PPIL3Q9H2H8 161 aaKnown RBP20.05■□□□□ 0.8
RAPGEF1-206ENST00000438647 MEIKINA0A087WXM9 373 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 VGLL3A8MV65 326 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 VHLP40337 213 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 KIAA2026Q5HYC2 2103 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 RBM48Q5RL73 367 aaKnown RBP20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 PRAMEF5Q5TYX0 476 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 AWAT2Q6E213 333 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 GLIPR1L1Q6UWM5 242 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 LIAT1Q6ZQX7 453 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 UQCC2Q9BRT2 126 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 DPCDQ9BVM2 203 aaPredicted RBP20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 TCF7L1Q9HCS4 588 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 ABCB10Q9NRK6 738 aa20.04■□□□□ 0.8
RAPGEF1-206ENST00000438647 GEMIN2O14893 280 aaKnown RBP20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 MMP23AO75900 390 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 GLP1RP43220 463 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 SSX2Q16385 188 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 UNQ9370/PRO34162Q6UXP9 181 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 ABHD12Q8N2K0 398 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 SUMF2Q8NBJ7 301 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 NDNFQ8TB73 568 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 ZNF596Q8TC21 504 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 SPACA1Q9HBV2 294 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 ISYNA1Q9NPH2 558 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 KIF25Q9UIL4 384 aa20.03■□□□□ 0.8
RAPGEF1-206ENST00000438647 HSMCR30P0CW71 290 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 PAX6P26367 422 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 FAM189A2Q15884 450 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 LY6EQ16553 131 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 RSBN1Q5VWQ0 802 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 LIPKQ5VXJ0 399 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 Q6ZSV7 163 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 LINC01006Q8NI28 216 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 PHYHIPQ92561 330 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 GHRLQ9UBU3 117 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 RNF114Q9Y508 228 aa20.02■□□□□ 0.8
RAPGEF1-206ENST00000438647 KBTBD11-OT1A0A1B0GTJ5 212 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 A0A1W2PP11 408 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 TSPAN9O75954 239 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 HTR1DP28221 377 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 CD34P28906 385 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 TRAM1Q15629 374 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 ATAD3CQ5T2N8 411 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 LYPD6Q86Y78 171 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 WFDC12Q8WWY7 111 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 C16orf95Q9H693 158 aa20.01■□□□□ 0.79
RAPGEF1-206ENST00000438647 SC5DO75845 299 aa20■□□□□ 0.79
RAPGEF1-206ENST00000438647 PSMA1P25786 263 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms