RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PLPPR1Q8TBJ4 325 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 SMR3AQ99954 134 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 SULT4A1Q9BR01 284 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 NUDT16L1Q9BRJ7 211 aaKnown RBP12.7□□□□□ -0.38
CNOT9-205ENST00000433439 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 PECRQ9BY49 303 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 C6orf62Q9GZU0 229 aaPredicted RBP12.7□□□□□ -0.38
CNOT9-205ENST00000433439 IFT22Q9H7X7 185 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
CNOT9-205ENST00000433439 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 MMP26Q9NRE1 261 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 C19orf12Q9NSK7 152 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 RCC2Q9P258 522 aaKnown RBP12.7□□□□□ -0.38
CNOT9-205ENST00000433439 MALRD1Q5VYJ5 2156 aa12.7□□□□□ -0.38
CNOT9-205ENST00000433439 YLPM1P49750 1951 aaKnown RBP12.69□□□□□ -0.38
CNOT9-205ENST00000433439 ZFHX3Q15911 3703 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 H3BUI4 141 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 RAB27BO00194 218 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 GPR37O15354 613 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
CNOT9-205ENST00000433439 EIF4EP06730 217 aaKnown RBP12.69□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM50BP56557 158 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 RPL31P62899 125 aaKnown RBP12.69□□□□□ -0.38
CNOT9-205ENST00000433439 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 MCFD2Q8NI22 146 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM186Q96B77 213 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 COQ2Q96H96 371 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 DIABLOQ9NR28 239 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 HIF1ANQ9NWT6 349 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 KIF25Q9UIL4 384 aa12.69□□□□□ -0.38
CNOT9-205ENST00000433439 RPUSD1Q9UJJ7 312 aaKnown RBP12.69□□□□□ -0.38
CNOT9-205ENST00000433439 OTOGQ6ZRI0 2925 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 F8P00451 2351 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 MEIKINA0A087WXM9 373 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 PPIAL4CA0A0B4J2A2 164 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 IGHV2-70DA0A0C4DH43 119 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 CTDSP2O14595 271 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 ENSAO43768 121 aaKnown RBP12.68□□□□□ -0.38
CNOT9-205ENST00000433439 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 GNB3P16520 340 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 KCNJ3P48549 501 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 P2RX3P56373 397 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 PLAC9Q5JTB6 97 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 DCAF12L2Q5VW00 463 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 BTNL3Q6UXE8 466 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 S100A16Q96FQ6 103 aaKnown RBP12.68□□□□□ -0.38
CNOT9-205ENST00000433439 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 SLIRPQ9GZT3 109 aaKnown RBP12.68□□□□□ -0.38
CNOT9-205ENST00000433439 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
CNOT9-205ENST00000433439 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
CNOT9-205ENST00000433439 TRBV23-1A0A0A0MS06 115 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 TRAV20A0A0B4J274 112 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM30CPA0ZSE6 113 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
CNOT9-205ENST00000433439 CSN2P05814 226 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 ELK1P19419 428 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 CDK2P24941 298 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 GLP1RP43220 463 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 DYNC1I2Q13409 638 aaKnown RBP12.67□□□□□ -0.38
CNOT9-205ENST00000433439 ARFRP1Q13795 201 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 RSBN1Q5VWQ0 802 aaPredicted RBP12.67□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 FAHD2BQ6P2I3 314 aaPredicted RBP12.67□□□□□ -0.38
CNOT9-205ENST00000433439 SETD6Q8TBK2 473 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 FAHD2AQ96GK7 314 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 AK3Q9UIJ7 227 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
CNOT9-205ENST00000433439 ABCA2Q9BZC7 2435 aa12.67□□□□□ -0.38
CNOT9-205ENST00000433439 AKAP9Q99996 3911 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 hADV38S2A0JD32 116 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ODAMA1E959 279 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 SCGNO76038 276 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 APOA1P02647 267 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 GLAP06280 429 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 LIPFP07098 398 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 CD3GP09693 182 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 CCL3L1P16619 93 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ERP29P30040 261 aaKnown RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 DVL1P1P54792 670 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ARF6P62330 175 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ZNF273Q14593 569 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 CDNFQ49AH0 187 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 SLC35E4Q6ICL7 350 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 LAX1Q8IWV1 398 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 MRGPRDQ8TDS7 321 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms