RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 RPL31P62899 125 aaKnown RBP10.21□□□□□ -0.77
USP40-205ENST00000430158 SCN1BQ07699 218 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 ZNF273Q14593 569 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 GRK1Q15835 563 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 C1orf122Q6ZSJ8 110 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 KIR3DL3Q8N743 410 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 SUMF2Q8NBJ7 301 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 FAM46BQ96A09 425 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 TBX15Q96SF7 602 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 SELENOIQ9C0D9 397 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 CST11Q9H112 138 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 LPAR5Q9H1C0 372 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 PPA2Q9H2U2 334 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 NCOR1P1Q9H4R4 102 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 PLGRKTQ9HBL7 147 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 GLS2Q9UI32 602 aa10.21□□□□□ -0.77
USP40-205ENST00000430158 MPIG6BO95866 241 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 GLIPR1P48060 266 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 EFNB2P52799 333 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 P2RX3P56373 397 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 NCS1P62166 190 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 LSM3P62310 102 aaKnown RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 SFXN4Q6P4A7 337 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 BTNL3Q6UXE8 466 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 IL17RELQ6ZVW7 336 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 RTN4RL2Q86UN3 420 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 GAPTQ8N292 157 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 BPIFB2Q8N4F0 458 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 TPRX1Q8N7U7 411 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 H1FXQ92522 213 aaKnown RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 CORO2AQ92828 525 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 WDFY2Q96P53 400 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 NICN1Q9BSH3 213 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 MRI1Q9BV20 369 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 DPCDQ9BVM2 203 aaPredicted RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 TMEM59Q9BXS4 323 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 UNKLQ9H9P5 680 aaKnown RBP10.2□□□□□ -0.78
USP40-205ENST00000430158 KPTNQ9Y664 436 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 AUP1Q9Y679 476 aa10.2□□□□□ -0.78
USP40-205ENST00000430158 M0R1W7 72 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 OR7C1O76099 320 aaPredicted RBP10.19□□□□□ -0.78
USP40-205ENST00000430158 IL1AP01583 271 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 GLAP06280 429 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 CHATP28329 748 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 TMEM50BP56557 158 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 VBP1P61758 197 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 ARF6P62330 175 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 MXD1Q05195 221 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 AESQ08117 197 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 PAN3Q58A45 887 aaKnown RBP10.19□□□□□ -0.78
USP40-205ENST00000430158 GPR107Q5VW38 600 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 HCP5Q6MZN7 132 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 GPR141Q7Z602 305 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 PTX4Q96A99 478 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 BARHL1Q9BZE3 327 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 LIN7BQ9HAP6 207 aa10.19□□□□□ -0.78
USP40-205ENST00000430158 ODAMA1E959 279 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 C17orf98A8MV24 154 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 SOCS1O15524 211 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 PDCD6O75340 191 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 CCL3L1P16619 93 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 HOXB4P17483 251 aaPredicted RBP10.18□□□□□ -0.78
USP40-205ENST00000430158 RAB6AP20340 208 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 FUT3P21217 361 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 KCNJ3P48549 501 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 DLX1P56177 255 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 ERVFRD-1P60508 538 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 ATXN7L3Q14CW9 347 aaPredicted RBP10.18□□□□□ -0.78
USP40-205ENST00000430158 SLC35E4Q6ICL7 350 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 RAB12Q6IQ22 244 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 ZNF497Q6ZNH5 498 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 Q6ZPA2 131 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 GDPD3Q7L5L3 318 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 FAM185AQ8N0U4 392 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 PPP1R35Q8TAP8 253 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 DYRK2Q92630 601 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 SPACA1Q9HBV2 294 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 KIF25Q9UIL4 384 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 CDC42EP3Q9UKI2 254 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 RAB22AQ9UL26 194 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 LINC00312Q9Y6C7 94 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 CUBNO60494 3623 aa10.18□□□□□ -0.78
USP40-205ENST00000430158 MEX3AA1L020 520 aaKnown RBP10.17□□□□□ -0.78
USP40-205ENST00000430158 RAB27BO00194 218 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 HSPB6O14558 160 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 PAHP00439 452 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 MT-ND4P03905 459 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 IGHV4-38-2P0DP08 117 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 PRTN3P24158 256 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 EDDM3BP56851 147 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 KRBOX4Q5JUW0 171 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
USP40-205ENST00000430158 SLC25A46Q96AG3 418 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms