RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SIGIRRQ6IA17 410 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 SLC16A12Q6ZSM3 486 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 TCF23Q7RTU1 214 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 ANKRD13BQ86YJ7 626 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 NANPQ8TBE9 248 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 PLPPR1Q8TBJ4 325 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 NAA50Q9GZZ1 169 aaKnown RBP18.35■□□□□ 0.53
PTPN18-205ENST00000428843 LIN7BQ9HAP6 207 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 SPACA1Q9HBV2 294 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 RCC2Q9P258 522 aaKnown RBP18.35■□□□□ 0.53
PTPN18-205ENST00000428843 FBLN5Q9UBX5 448 aa18.35■□□□□ 0.53
PTPN18-205ENST00000428843 TMEM272A0A1B0GTI8 110 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 A0A1W2PPH5 198 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 hADV38S2A0JD32 116 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 CCL3L1P16619 93 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 KCNJ3P48549 501 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 PLA2G7Q13093 441 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 GPR107Q5VW38 600 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 SFXN4Q6P4A7 337 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 VMO1Q7Z5L0 202 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 POM121Q96HA1 1249 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 NICN1Q9BSH3 213 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 LPAR5Q9H1C0 372 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 DAPK2Q9UIK4 370 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 PEX16Q9Y5Y5 336 aa18.34■□□□□ 0.53
PTPN18-205ENST00000428843 A0A0A6YYD4 124 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 FUT3P21217 361 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 RPL5P46777 297 aaKnown RBP18.33■□□□□ 0.52
PTPN18-205ENST00000428843 VBP1P61758 197 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 NCS1P62166 190 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 BLMHQ13867 455 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 RSBN1Q5VWQ0 802 aaPredicted RBP18.33■□□□□ 0.52
PTPN18-205ENST00000428843 RAB12Q6IQ22 244 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 C1orf122Q6ZSJ8 110 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 URM1Q9BTM9 101 aaKnown RBP18.33■□□□□ 0.52
PTPN18-205ENST00000428843 BARHL1Q9BZE3 327 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 SIRT7Q9NRC8 400 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 SCOCQ9UIL1 159 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 LINC00312Q9Y6C7 94 aa18.33■□□□□ 0.52
PTPN18-205ENST00000428843 IGHV3OR16-10A0A075B7F0 116 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 TRAV40A0A0B4J280 105 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 ODAMA1E959 279 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 MCRIP1C9JLW8 97 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 PDCD6O75340 191 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 GABARAPO95166 117 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 DLX1P56177 255 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 DLX6P56179 175 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 NEK7Q8TDX7 302 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 CYYR1Q96J86 154 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 KIF25Q9UIL4 384 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 RAB22AQ9UL26 194 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 KIAA2026Q5HYC2 2103 aa18.32■□□□□ 0.52
PTPN18-205ENST00000428843 H3BUI4 141 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 FAM157CP0CG43 387 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 ZNF728P0DKX0 622 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 IGHV4-38-2P0DP08 117 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 CHATP28329 748 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 RPS19P39019 145 aaKnown RBP18.31■□□□□ 0.52
PTPN18-205ENST00000428843 EFNB2P52799 333 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 PAX5Q02548 391 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 PRB3Q04118 309 aaPredicted RBP18.31■□□□□ 0.52
PTPN18-205ENST00000428843 RBM39Q14498 530 aaKnown RBP18.31■□□□□ 0.52
PTPN18-205ENST00000428843 TRAPPC6BQ86SZ2 158 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 C11orf42Q8N5U0 333 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 ZNF714Q96N38 554 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 NEDD4LQ96PU5 975 aa18.31■□□□□ 0.52
PTPN18-205ENST00000428843 METTL8Q9H825 291 aaKnown RBP18.31■□□□□ 0.52
PTPN18-205ENST00000428843 UBE2J1Q9Y385 318 aaPredicted RBP18.31■□□□□ 0.52
PTPN18-205ENST00000428843 MEIKINA0A087WXM9 373 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 TRGV10A0A0A0MS01 117 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 C17orf98A8MV24 154 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 SOCS1O15524 211 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 IL1AP01583 271 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 GLAP06280 429 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 SNRPBP14678 240 aaKnown RBP18.3■□□□□ 0.52
PTPN18-205ENST00000428843 HOXB4P17483 251 aaPredicted RBP18.3■□□□□ 0.52
PTPN18-205ENST00000428843 BLVRBP30043 206 aaPredicted RBP18.3■□□□□ 0.52
PTPN18-205ENST00000428843 SERPINB10P48595 397 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 ERVFRD-1P60508 538 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 CTF1Q16619 201 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 NKAPLQ5M9Q1 402 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 IDNKQ5T6J7 187 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 SLC35E4Q6ICL7 350 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 FAM89BQ8N5H3 189 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 CORO2AQ92828 525 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 LHX4Q969G2 390 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 NCOR1P1Q9H4R4 102 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 NUP50Q9UKX7 468 aa18.3■□□□□ 0.52
PTPN18-205ENST00000428843 CENPVL3A0A0U1RRI6 287 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 UBE2QL1A1L167 161 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 RAB6AP20340 208 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 EPHA1P21709 976 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 PRTN3P24158 256 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 GPR157Q5UAW9 335 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 TNFRSF14Q92956 283 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 UNKLQ9H9P5 680 aaKnown RBP18.29■□□□□ 0.52
PTPN18-205ENST00000428843 ETAA1Q9NY74 926 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 OR6C3Q9NZP0 311 aa18.29■□□□□ 0.52
PTPN18-205ENST00000428843 hCG_1809904A0A1W2PP81 198 aa18.28■□□□□ 0.52
PTPN18-205ENST00000428843 A0A1W2PPE2 198 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms