RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 GUCA2BQ16661 112 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 SUMF2Q8NBJ7 301 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 AQP10Q96PS8 301 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 PRRX2Q99811 253 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 TAF9BQ9HBM6 251 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 ATPIF1Q9UII2 106 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 CACNA1DQ01668 2161 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 CADP27708 2225 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 F8W036 122 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 SIRPB1O00241 398 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 CST4P01036 141 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 TK1P04183 234 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 TMEM33P57088 247 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 BLOC1S1P78537 153 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 GAPTQ8N292 157 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 SLC35G3Q8N808 338 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 ZNF565Q8N9K5 539 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 OR5A2Q8NGI9 324 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 MAGT1Q9H0U3 335 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 UBE2J1Q9Y385 318 aaPredicted RBP9.88□□□□□ -0.83
UBR4-207ENST00000425413 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 GRPP07492 148 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 COX5BP10606 129 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 IGHV1-2P23083 117 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 GNRHRP30968 328 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 GTF3C1Q12789 2109 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 FBXW12Q6X9E4 464 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 DECR2Q9NUI1 292 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 LUZP4Q9P127 313 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 IGKV1-6A0A0C4DH72 117 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 TMEM218A2RU14 115 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 DEDDO75618 318 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 CTRB1P17538 263 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 GNG3P63215 75 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 AKIRIN2Q53H80 203 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 CTRB2Q6GPI1 263 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 VWA1Q6PCB0 445 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 ZNF818PQ6ZRF7 136 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 TBC1D26Q86UD7 250 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 SYT3Q9BQG1 590 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 ESRP2Q9H6T0 727 aaKnown RBP9.87□□□□□ -0.83
UBR4-207ENST00000425413 ZDHHC11Q9H8X9 412 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 RNF122Q9H9V4 155 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 CDH20Q9HBT6 801 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 Q9N2K0 584 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 CCL28Q9NRJ3 127 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
UBR4-207ENST00000425413 KMT2EQ8IZD2 1858 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 MUC6Q6W4X9 2439 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 C3orf85A0A1B0GTC6 90 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 MPPED1O15442 326 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 MED6O75586 246 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 ATG12O94817 140 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 TFF1P04155 84 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 TBC1D28Q2M2D7 210 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 DPPA2Q7Z7J5 298 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 PUSL1Q8N0Z8 303 aaKnown RBP9.87□□□□□ -0.83
UBR4-207ENST00000425413 FAM58AQ8N1B3 248 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 NANOS1Q8WY41 292 aaKnown RBP9.87□□□□□ -0.83
UBR4-207ENST00000425413 ARL11Q969Q4 196 aa9.87□□□□□ -0.83
UBR4-207ENST00000425413 MSI2Q96DH6 328 aaKnown RBP9.87□□□□□ -0.83
UBR4-207ENST00000425413 ARHGAP21Q5T5U3 1957 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 TNRC6AQ8NDV7 1962 aaKnown RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 TRAV24A0A0B4J272 114 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 A0A1B0GV50 99 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 NKX2-6A6NCS4 301 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 H0YL77 283 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 CDIPTO14735 213 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 SLC34A2O95436 690 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 OMGP23515 440 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 CEBPDP49716 269 aaPredicted RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 ZNF573Q86YE8 665 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 CBLN2Q8IUK8 224 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 LGI3Q8N145 548 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 SAV1Q9H4B6 383 aaPredicted RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 OR14J1Q9UGF5 321 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 DCHS1Q96JQ0 3298 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 DIDO1Q9BTC0 2240 aaKnown RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 GALR2O43603 387 aaPredicted RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 SS18L1O75177 396 aaPredicted RBP9.86□□□□□ -0.83
UBR4-207ENST00000425413 PPP1CBP62140 327 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 NHLH2Q02577 135 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 FOXF2Q12947 444 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 PIP4P1Q86T03 277 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 WDR86Q86TI4 376 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 OR1J1Q8NGS3 322 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 OR51H1Q8NH63 302 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 SLC25A40Q8TBP6 338 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 KIRREL1Q96J84 757 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 ASCL3Q9NQ33 180 aa9.86□□□□□ -0.83
UBR4-207ENST00000425413 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 DEGS1O15121 323 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 NAPSAO96009 420 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 LYL1P12980 280 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 ADCYAP1P18509 176 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 LPAR6P43657 344 aa9.85□□□□□ -0.83
UBR4-207ENST00000425413 IZUMO4Q1ZYL8 232 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms