RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 IGHV2-70P01814 119 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 AMBPP02760 352 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 HLA-DPB1P04440 258 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PPIAL4FP0DN26 164 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 IGHV4-31P0DP07 118 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 IRF2P14316 349 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CCL1P22362 96 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ANOS1P23352 680 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 EEF1B2P24534 225 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MDH2P40926 338 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PMELP40967 661 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 NPY4RP50391 375 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 GBX2P52951 348 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR12D2P58182 307 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ACTA2P62736 377 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ACTG2P63267 376 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MED21Q13503 144 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TP53I3Q53FA7 332 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SPRNQ5BIV9 151 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 FAM166AQ6J272 317 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TRAT1Q6PIZ9 186 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SSX6Q7RTT6 188 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LHFPL3Q86UP9 236 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 C8orf59Q8N0T1 100 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SPICQ8N5J4 248 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MAPK1IP1LQ8NDC0 245 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR10AD1Q8NGE0 317 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR10V1Q8NGI7 309 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR5A2Q8NGI9 324 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR52I1Q8NGK6 324 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR10Z1Q8NGY1 313 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SPATA3Q8NHX4 192 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF671Q8TAW3 534 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR51E1Q8TCB6 317 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 APH1BQ8WW43 257 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR5P3Q8WZ94 311 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PIGCQ92535 297 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 RORBQ92753 470 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 C10orf35Q96D05 121 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 RNF170Q96K19 258 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SMR3AQ99954 134 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ADAT1Q9BUB4 502 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 RTL8AQ9BWD3 113 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PATZ1Q9HBE1 687 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM165Q9HC07 324 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 AMBNQ9NP70 447 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 GPR84Q9NQS5 396 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CHCHD3Q9NX63 227 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TREM2Q9NZC2 230 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ENPP5Q9UJA9 477 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 GNG8Q9UK08 70 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 GAB2Q9UQC2 676 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PPIAL4AQ9Y536 164 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CACNG2Q9Y698 323 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 V9GYS6 101 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ADGRG4Q8IZF6 3080 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PPIAL4CA0A0B4J2A2 164 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LRP5LA4QPB2 252 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR5B21A6NL26 309 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 J3QLW9 94 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LGALS8O00214 317 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SYT7O43581 403 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CRLF1O75462 422 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 FOXH1O75593 365 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CLIC3O95833 236 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 SERPINA3P01011 423 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 NRASP01111 189 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LHBP01229 141 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 IGHV2-5P01817 119 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ISG15P05161 165 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 HTR1AP08908 422 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 WNT2P09544 360 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 UBCP0CG48 685 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LIMS3P0CW19 117 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 LIMS4P0CW20 117 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PIPP12273 146 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF19P17023 458 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ACKR3P25106 362 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 HSPA13P48723 471 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 HOXA1P49639 335 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 BTG1P62324 171 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 GNG3P63215 75 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MFGE8Q08431 387 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ACSM1Q08AH1 577 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PRDX4Q13162 271 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ZMYND11Q15326 602 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MPPED2Q15777 294 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 KCNJ8Q15842 424 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CEACAM21Q3KPI0 293 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 CLVS2Q5SYC1 327 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 AVPI1Q5T686 147 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM42Q69YG0 159 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TMPRSS11AQ6ZMR5 421 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 COMMD2Q86X83 199 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 C11orf53Q8IXP5 236 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TEX29Q8N6K0 151 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR1M1Q8NGA1 313 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR2G2Q8NGZ5 317 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 OR51F2Q8NH61 342 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms