RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 C8orf46Q8TAG6 207 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 CYYR1Q96J86 154 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 NICN1Q9BSH3 213 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 MRI1Q9BV20 369 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 TMEM59Q9BXS4 323 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 IFT22Q9H7X7 185 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 TMEM160Q9NX00 188 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 ONECUT1Q9UBC0 465 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 PEX16Q9Y5Y5 336 aa7.64□□□□□ -1.19
PDGFC-202ENST00000422544 A0A0A6YYD4 124 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A10PA6NDY2 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A18PA6NE21 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A16PA6NEW6 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A20PA6NIJ5 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A8PA6NJQ4 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A7PA6NKC0 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A22PA8MWA6 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A12PA8MX19 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A5PA8MXJ8 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A23PA8MXZ1 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 SOCS1O15524 211 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 TOX4O94842 621 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 PAHP00439 452 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 IL1AP01583 271 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A15PP0C7V4 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A13PP0C7W8 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A14PP0C7W9 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FAM90A24PP0C7X0 464 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
PDGFC-202ENST00000422544 CCL3L1P16619 93 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FUT3P21217 361 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 ERP29P30040 261 aaKnown RBP7.63□□□□□ -1.19
PDGFC-202ENST00000422544 RANBP1P43487 201 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 GLIPR1P48060 266 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 EFNB2P52799 333 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 P2RX3P56373 397 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 PRB3Q04118 309 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-202ENST00000422544 ZNF273Q14593 569 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 KRBOX4Q5JUW0 171 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 NKAPLQ5M9Q1 402 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 RAB12Q6IQ22 244 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 PLPPR1Q8TBJ4 325 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 COQ2Q96H96 371 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 WDFY2Q96P53 400 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 NEDD4LQ96PU5 975 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 PCGF1Q9BSM1 259 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 URM1Q9BTM9 101 aaKnown RBP7.63□□□□□ -1.19
PDGFC-202ENST00000422544 TM2D1Q9BX74 207 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 BEX2Q9BXY8 128 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 BARHL1Q9BZE3 327 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 LPAR5Q9H1C0 372 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 SPACA1Q9HBV2 294 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 RCC2Q9P258 522 aaKnown RBP7.63□□□□□ -1.19
PDGFC-202ENST00000422544 FBLN5Q9UBX5 448 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 RAB22AQ9UL26 194 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 DOCK11Q5JSL3 2073 aa7.63□□□□□ -1.19
PDGFC-202ENST00000422544 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 IGHV3OR16-10A0A075B7F0 116 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 hADV38S2A0JD32 116 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 ODAMA1E959 279 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 UBE2QL1A1L167 161 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 FUOMA2VDF0 154 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 MCRIP1C9JLW8 97 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 PDCD6O75340 191 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 CSN2P05814 226 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 MMP9P14780 707 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 BLVRBP30043 206 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-202ENST00000422544 SRP14P37108 136 aaKnown RBP7.62□□□□□ -1.19
PDGFC-202ENST00000422544 VEGFCP49767 419 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 DLX1P56177 255 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 ERVFRD-1P60508 538 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 MEF2CQ06413 473 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-202ENST00000422544 METTL11BQ5VVY1 283 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 RSBN1Q5VWQ0 802 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-202ENST00000422544 TCF23Q7RTU1 214 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 RTN4RL2Q86UN3 420 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 CMTM4Q8IZR5 234 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 FAM89BQ8N5H3 189 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 Q8N7P7 452 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 NDNFQ8TB73 568 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 NEK7Q8TDX7 302 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 SLC25A46Q96AG3 418 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 DMRTB1Q96MA1 342 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 TBX15Q96SF7 602 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 SIRPDQ9H106 197 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 KIF25Q9UIL4 384 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 CDC42EP3Q9UKI2 254 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 KPTNQ9Y664 436 aa7.62□□□□□ -1.19
PDGFC-202ENST00000422544 MEIKINA0A087WXM9 373 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 TRGV10A0A0A0MS01 117 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 TRAV39A0A0B4J263 110 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 A0A1W2PPH5 198 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 H3BUI4 141 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 M0R1W7 72 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 CRLF1O75462 422 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 MT-ND4P03905 459 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 ZNF728P0DKX0 622 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 RAB6AP20340 208 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 HNF1AP20823 631 aa7.61□□□□□ -1.19
PDGFC-202ENST00000422544 CHATP28329 748 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms