RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GYPBP06028 91 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 SFTA3P0C7M3 94 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 HTR2CP28335 458 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 LOXL3P58215 753 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CYCSP99999 105 aaKnown RBP8.14□□□□□ -1.11
SNHG3-201ENST00000413987 OR1Q1Q15612 314 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 NNATQ16517 81 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 LRRC37A5PQ49AS3 106 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 GCSAMLQ5JQS6 135 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 HLA-DQA1Q5Y7H0 255 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 COX15Q7KZN9 410 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 LRRTM1Q86UE6 522 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF808Q8N4W9 903 aaPredicted RBP8.14□□□□□ -1.11
SNHG3-201ENST00000413987 RFLNBQ8N5W9 214 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ELOVL1Q9BW60 279 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 TTTY10Q9BZA0 68 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 MEMO1Q9Y316 297 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CEP295Q9C0D2 2601 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 IGHV3-20A0A0C4DH32 117 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 GPR75O95800 540 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 HLA-AP01891 365 aaKnown RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PPBPP02775 128 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 FAM157CP0CG43 387 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 MUC1P15941 1255 aaPredicted RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 CD81P60033 236 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 ATXN7L3Q14CW9 347 aaPredicted RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 LANCL3Q6ZV70 420 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 FAM220AQ7Z4H9 259 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR52E2Q8NGJ4 325 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR1J2Q8NGS2 313 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR8S1Q8NH09 359 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR5AK2Q8NH90 309 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 RAB3CQ96E17 227 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 FAHD2AQ96GK7 314 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 SMIM8Q96KF7 97 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 CLCC1Q96S66 551 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PHB2Q99623 299 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PRTFDC1Q9NRG1 225 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 TIMM10BQ9Y5J6 103 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 COL5A1P20908 1838 aaPredicted RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 TRBV6-7A0A0A0MS04 114 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 IDSB3KWA1 339 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 C9J4A7 227 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 LYPD3O95274 346 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 IFNA17P01571 189 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 CD5P06127 495 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 DBIP07108 87 aaKnown RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR8U8P0C7N1 319 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 NBL1P41271 181 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PPICP45877 212 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 RBM39Q14498 530 aaKnown RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 MEF2DQ14814 521 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 TRIP6Q15654 476 aaKnown RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 ARHGAP11BQ3KRB8 267 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 SLC29A4Q7RTT9 530 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 SLC25A42Q86VD7 318 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 SLC16A11Q8NCK7 471 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR10R2Q8NGX6 335 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 OR51A7Q8NH64 312 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PTH2Q96A98 100 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 SEC22AQ96IW7 307 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 MICU1Q9BPX6 476 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 WDR77Q9BQA1 342 aaPredicted RBP8.13□□□□□ -1.11
SNHG3-201ENST00000413987 CSTL1Q9H114 145 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 RPS10P5Q9NQ39 176 aa8.13□□□□□ -1.11
SNHG3-201ENST00000413987 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 TRAV27A0A087WT01 109 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 A0A1B0GV90 55 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 CLDN34H7C241 214 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 RAMP3O60896 148 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 FCN3O75636 299 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 UTS2O95399 124 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 PGAM2P15259 253 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 RAB5AP20339 215 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 CSRP1P21291 193 aaKnown RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 TIMP3P35625 211 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 DVL1P1P54792 670 aaPredicted RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 HES3Q5TGS1 186 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 C1QL4Q86Z23 238 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 RGP1Q92546 391 aaPredicted RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 CPNE2Q96FN4 548 aaPredicted RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 SULT4A1Q9BR01 284 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 DDA1Q9BW61 102 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 ULBP3Q9BZM4 244 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 MEPEQ9NQ76 525 aaPredicted RBP8.12□□□□□ -1.11
SNHG3-201ENST00000413987 LOXL2Q9Y4K0 774 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 SPTBN4Q9H254 2564 aa8.12□□□□□ -1.11
SNHG3-201ENST00000413987 H0Y980 276 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 OIP5O43482 229 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 NDUFB2O95178 105 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 IFNA10P01566 189 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 IFNA21P01568 189 aa8.11□□□□□ -1.11
SNHG3-201ENST00000413987 ZBTB25P24278 435 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms