RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CLEC18CQ8NCF0 446 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR5AP2Q8NGF4 316 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR5T2Q8NGG2 359 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR51S1Q8NGJ8 323 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR5H2Q8NGV7 314 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 OR4K15Q8NH41 348 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ANGPTL6Q8NI99 470 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 PLPPR1Q8TBJ4 325 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 MRPL30Q8TCC3 161 aaKnown RBP5.57□□□□□ -1.52
VPS41-204ENST00000413141 CREB3L1Q96BA8 519 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 VRK1Q99986 396 aaPredicted RBP5.57□□□□□ -1.52
VPS41-204ENST00000413141 CACNG6Q9BXT2 260 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 C20orf85Q9H1P6 137 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 RIMS4Q9H426 269 aaPredicted RBP5.57□□□□□ -1.52
VPS41-204ENST00000413141 UBTD1Q9HAC8 227 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ZNF286AQ9HBT8 521 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 TMEM165Q9HC07 324 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 NUDT15Q9NV35 164 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 SLC2A8Q9NY64 477 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 ANXA10Q9UJ72 324 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 NUBP2Q9Y5Y2 271 aa5.57□□□□□ -1.52
VPS41-204ENST00000413141 CACNA1DQ01668 2161 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 SPTBN1Q01082 2364 aaKnown RBP5.56□□□□□ -1.52
VPS41-204ENST00000413141 A0A0B4J293 547 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 POM121CA8CG34 1229 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 DISC1C4P0D8 188 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 H7C1Q1 480 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 LGALS8O00214 317 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 ZNF205O95201 554 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 CLDN1O95832 211 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
VPS41-204ENST00000413141 PRDX2P32119 198 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 KCNJ3P48549 501 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 HLA-DRB3P79483 266 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 PAX5Q02548 391 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 TLE4Q04727 773 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 CDK10Q15131 360 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 RBMS2Q15434 407 aaKnown RBP5.56□□□□□ -1.52
VPS41-204ENST00000413141 SRSF7Q16629 238 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS41-204ENST00000413141 CHRFAM7AQ494W8 412 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 RSBN1Q5VWQ0 802 aaPredicted RBP5.56□□□□□ -1.52
VPS41-204ENST00000413141 ZNF880Q6PDB4 577 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 C20orf204Q6ZNR8 217 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 IDO2Q6ZQW0 420 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 BTN2A1Q7KYR7 527 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 OVCH2Q7RTZ1 564 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 ARRDC1Q8N5I2 433 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 ASCC1Q8N9N2 400 aaKnown RBP5.56□□□□□ -1.52
VPS41-204ENST00000413141 CCL17Q92583 94 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 MRGPRFQ96AM1 343 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 SDSLQ96GA7 329 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 COQ2Q96H96 371 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 GAFA1Q96PS6 74 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 SLC6A7Q99884 636 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 PRRT1Q99946 306 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 GINS4Q9BRT9 223 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 MARVELD1Q9BSK0 173 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 SHARPINQ9H0F6 387 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 RAB1BQ9H0U4 201 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 Q9N2K0 584 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 EHFQ9NZC4 300 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 LAMP3Q9UQV4 416 aa5.56□□□□□ -1.52
VPS41-204ENST00000413141 PKDREJQ9NTG1 2253 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ARFGEF3Q5TH69 2177 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 TRAV6A0A075B6T7 132 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 PPIAL4EA0A075B759 164 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 TRAV38-1A0A0B4J264 116 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 KIR2DS1A0A191URI9 304 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 A0A1B0GW55 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 TMEM30CPA0ZSE6 113 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 A1L4Q6 167 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 NKX6-3A6NJ46 265 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 TRDCB7Z8K6 153 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 PPIAL4DF5H284 164 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 INMT-MINDY4F8WBC2 141 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 K7N7A8 449 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 ARPC1BO15143 372 aaKnown RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 SIGLEC5O15389 551 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 FABP7O15540 132 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 RP2O75695 350 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 GYPAP02724 150 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 IFNA6P05013 189 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 GSTT2P0CG29 244 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L2P0CJ85 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L3P0CJ86 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L4P0CJ87 422 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L5P0CJ88 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L6P0CJ89 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 DUX4L7P0CJ90 424 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 PPIAL4FP0DN26 164 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 SELLP14151 372 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 RCC1P18754 421 aaPredicted RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 KIR2DS4P43632 304 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 GABRA2P47869 451 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 OR3A3P47888 321 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 RAG2P55895 527 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
VPS41-204ENST00000413141 KIR2DS1Q14954 304 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 HERPUD1Q15011 391 aa5.55□□□□□ -1.52
VPS41-204ENST00000413141 GRK1Q15835 563 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms