RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 C11orf42Q8N5U0 333 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 OR51D1Q8NGF3 324 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 COQ2Q96H96 371 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 FUNDC2Q9BWH2 189 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 TMEM59Q9BXS4 323 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 BARHL1Q9BZE3 327 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 RNF167Q9H6Y7 350 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 METTL8Q9H825 291 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 NUP50Q9UKX7 468 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 LINC00312Q9Y6C7 94 aa12.68□□□□□ -0.38
TRAPPC12-203ENST00000411973 C17orf98A8MV24 154 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 LDLRAD4O15165 306 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 RBP4P02753 201 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 GLAP06280 429 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 ZNF728P0DKX0 622 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 PRTN3P24158 256 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 SCGB2A2Q13296 93 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 BLMHQ13867 455 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 KRBOX4Q5JUW0 171 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 ATAD3CQ5T2N8 411 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 SIGIRRQ6IA17 410 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 VMO1Q7Z5L0 202 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 CORO2AQ92828 525 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 KCNK15Q9H427 330 aa12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-203ENST00000411973 CUBNO60494 3623 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 A0A1W2PR64 198 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 ODAMA1E959 279 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 HSPB6O14558 160 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 IGHV4-38-2P0DP08 117 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 CCL3L1P16619 93 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 FUT3P21217 361 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 GLIPR1P48060 266 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 RIPPLY3P57055 190 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 BPIFB3P59826 476 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 RAB12Q6IQ22 244 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 FAM89BQ8N5H3 189 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 ZNF714Q96N38 554 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 LPAR5Q9H1C0 372 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 LIN7BQ9HAP6 207 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 PEX16Q9Y5Y5 336 aa12.66□□□□□ -0.38
TRAPPC12-203ENST00000411973 TRGV10A0A0A0MS01 117 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 TMEM272A0A1B0GTI8 110 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 TMEM127O75204 238 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 PDCD6O75340 191 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 EPHA1P21709 976 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 GPR157Q5UAW9 335 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 C9orf139Q6ZV77 190 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 GAPTQ8N292 157 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 PTX4Q96A99 478 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 SIRT7Q9NRC8 400 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 TAS2R3Q9NYW6 316 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.38
TRAPPC12-203ENST00000411973 SMIM30A4D0T7 59 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 CLEC2LP0C7M8 214 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 RAB6AP20340 208 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 CHATP28329 748 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 MXD1Q05195 221 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 NCR3LG1Q68D85 454 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 ZNF497Q6ZNH5 498 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 SLC16A12Q6ZSM3 486 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 ANKRD13BQ86YJ7 626 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 ZNF565Q8N9K5 539 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 LHX4Q969G2 390 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 NICN1Q9BSH3 213 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 ZNF69Q9UC07 566 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 KIF25Q9UIL4 384 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 RAB22AQ9UL26 194 aa12.64□□□□□ -0.39
TRAPPC12-203ENST00000411973 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 A0A0A6YYD4 124 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 MEX3AA1L020 520 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 FOXI3A8MTJ6 420 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 RNASEK-C17orf49H0YIS7 233 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 CA11O75493 328 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 GABARAPO95166 117 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 IL1AP01583 271 aa12.63□□□□□ -0.39
TRAPPC12-203ENST00000411973 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms