RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FADS6Q8N9I5 356 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 LINC00052Q96N35 136 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 DNAJB12Q9NXW2 375 aaKnown RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 PCOLCE2Q9UKZ9 415 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 H3BMH7 237 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 GSTZ1O43708 216 aaPredicted RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 RHBDL1O75783 438 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 KLF7O75840 302 aaPredicted RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 ACTL6AO96019 429 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 GCGP01275 180 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 MBPP02686 304 aaPredicted RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 HOXC4P09017 264 aaPredicted RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 HLA-GP17693 338 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 RAC3P60763 192 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 MFSD2BA6NFX1 497 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 INHBBP09529 407 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 CSF2RBP32927 897 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 DUSP18Q8NEJ0 188 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 OR6X1Q8NH79 312 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 Q8WTZ3 238 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 ZNF275Q9NSD4 429 aaPredicted RBP10.68□□□□□ -0.7
SMCR8-201ENST00000406438 LPAR3Q9UBY5 353 aa10.68□□□□□ -0.7
SMCR8-201ENST00000406438 ZFPL1O95159 310 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 SLC6A1P30531 599 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 KIR2DL1P43626 348 aaPredicted RBP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 KIR2DL2P43627 348 aaPredicted RBP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 KIR3DL2P43630 455 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 HES3Q5TGS1 186 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 TBC1D26Q86UD7 250 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 OR10D4PQ8NGN7 298 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 ASCL3Q9NQ33 180 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 TREM2Q9NZC2 230 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 CLDN34H7C241 214 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 FOXO1Q12778 655 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 ASB10Q8WXI3 467 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 SRD5A3Q9H8P0 318 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 MPC1Q9Y5U8 109 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 SFT2D2O95562 160 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 SOX8P57073 446 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 SRSF9Q13242 221 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 TP53I13Q8NBR0 393 aaPredicted RBP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 WNT16Q9UBV4 365 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 ZMIZ1Q9ULJ6 1067 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 NKX2-2O95096 273 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 D2HGDHQ8N465 521 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 MTFP1Q9UDX5 166 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 WNT1P04628 370 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 COL8A1P27658 744 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 ZNF793Q6ZN11 406 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 OR5A2Q8NGI9 324 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 KCNMB1Q16558 191 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 WDR74Q6RFH5 385 aaPredicted RBP10.67□□□□□ -0.7
SMCR8-201ENST00000406438 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 HAND1O96004 215 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 MELTFP08582 738 aa10.67□□□□□ -0.7
SMCR8-201ENST00000406438 RELBQ01201 579 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 Q6ZS52 159 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 SLC25A40Q8TBP6 338 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 TBX21Q9UL17 535 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 STARD10Q9Y365 291 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 PCMT1P22061 227 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 MAP6Q96JE9 813 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 ABHD14AQ9BUJ0 271 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 PRDM7Q9NQW5 492 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 VSIG4Q9Y279 399 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
SMCR8-201ENST00000406438 ACAA2P42765 397 aaKnown RBP10.66□□□□□ -0.7
SMCR8-201ENST00000406438 CLDN18P56856 261 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 RAE1P78406 368 aaKnown RBP10.66□□□□□ -0.7
SMCR8-201ENST00000406438 OIT3Q8WWZ8 545 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 COL18A1P39060 1754 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 ISLRO14498 428 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 PDE6DO43924 150 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 FAM74A3Q4VXF1 159 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 RNF165Q6ZSG1 346 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 RPS4Y2Q8TD47 263 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 ATG101Q9BSB4 218 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 AKIP1Q9NQ31 210 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 C11orf94C9JXX5 98 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 MPC2O95563 127 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 SPICQ8N5J4 248 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 PIPOXQ9P0Z9 390 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 EP300Q09472 2414 aaPredicted RBP10.66□□□□□ -0.7
SMCR8-201ENST00000406438 RBFOX3A6NFN3 312 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 J3KRW8 73 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 ST3GAL2Q16842 350 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 C12orf73Q69YU5 71 aa10.66□□□□□ -0.7
SMCR8-201ENST00000406438 C9orf172C9J069 976 aa10.65□□□□□ -0.7
SMCR8-201ENST00000406438 ARG1P05089 322 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms