RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 HSD17B6O14756 317 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 MPZL2O60487 215 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 CYB5AP00167 134 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 CSN2P05814 226 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 ZNF44P15621 663 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 CXCR4P61073 352 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 CDK5Q00535 292 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 RUNX1Q01196 453 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 Q8N1Y9 231 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 FAM71E2Q8N5Q1 922 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 ZNF491Q8N8L2 437 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 OR6Q1Q8NGQ2 317 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 RBMXL1Q96E39 390 aaKnown RBP13.41□□□□□ -0.26
HMGN1-203ENST00000380748 UBE2E2Q96LR5 201 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 OR6C3Q9NZP0 311 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 MRM2Q9UI43 246 aaKnown RBP13.41□□□□□ -0.26
HMGN1-203ENST00000380748 VSIG4Q9Y279 399 aa13.41□□□□□ -0.26
HMGN1-203ENST00000380748 IGHV1-3A0A0C4DH29 117 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 IGKV1-12A0A0C4DH73 117 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 SLC33A1O00400 549 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-203ENST00000380748 SYT7O43581 403 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 RPP14O95059 124 aaKnown RBP13.4□□□□□ -0.26
HMGN1-203ENST00000380748 IGKV1D-12P01611 117 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 RBP2P50120 134 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 ATP1B3P54709 279 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 SLURP1P55000 103 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 TMEM236Q5W0B7 351 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 Q6P435 159 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 OR13A1Q8NGR1 328 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 OR10X1Q8NGY0 326 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 OR2T10Q8NGZ9 312 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 GIPC3Q8TF64 312 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 ST6GALNAC6Q969X2 333 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 CNN2Q99439 309 aaKnown RBP13.4□□□□□ -0.26
HMGN1-203ENST00000380748 S1PR3Q99500 378 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 RASL11BQ9BPW5 248 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 COMMD4Q9H0A8 199 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-203ENST00000380748 IDI2-AS1Q9NZ38 188 aa13.4□□□□□ -0.26
HMGN1-203ENST00000380748 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 MAGEA13PA6NCF6 341 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 IL1AP01583 271 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 MTCP1P56278 107 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF816Q0VGE8 651 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-203ENST00000380748 PDZK1IP1Q13113 114 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 HDXQ7Z353 690 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 DNAAF1Q8NEP3 725 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 RFESDQ8TAC1 157 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 OSBPL10Q9BXB5 764 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 CCDC134Q9H6E4 229 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 TNCP24821 2201 aa13.39□□□□□ -0.27
HMGN1-203ENST00000380748 TCRBV5S2A0A599 114 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 A8MZ25 164 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 SERPINA3P01011 423 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 GAPDHP04406 335 aaKnown RBP13.38□□□□□ -0.27
HMGN1-203ENST00000380748 IGF1P05019 195 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 PRDX6P30041 224 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 ZP1P60852 638 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 ISL1P61371 349 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 SLC35F2Q8IXU6 374 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 KIF25Q9UIL4 384 aa13.38□□□□□ -0.27
HMGN1-203ENST00000380748 MEIKINA0A087WXM9 373 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 HSPB6O14558 160 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 KDM4BO94953 1096 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 OSMP13725 252 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
HMGN1-203ENST00000380748 SOX6P35712 828 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 ACTR3P61158 418 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 HAGHQ16775 308 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 LYPD6Q86Y78 171 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 CHST4Q8NCG5 386 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 TMEM104Q8NE00 496 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 LINC00574Q9H8X3 128 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 WSB1Q9Y6I7 421 aa13.37□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF736B4DX44 427 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-203ENST00000380748 G3V318 75 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 MOSP00540 346 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 IFNA6P05013 189 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 OR5H8P0DN80 308 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 HTR1FP30939 366 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 SSTR5P35346 364 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 F2RL1P55085 397 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 BCDIN3DQ7Z5W3 292 aaKnown RBP13.36□□□□□ -0.27
HMGN1-203ENST00000380748 SGPP2Q8IWX5 399 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF565Q8N9K5 539 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 OR51T1Q8NGJ9 327 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 OR5D18Q8NGL1 313 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 MRGPRDQ8TDS7 321 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms