RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NKX2-4Q9H2Z4 354 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 OR51I2Q9H344 312 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 LTBP2Q14767 1821 aa8.17□□□□□ -1.1
PTPRA-204ENST00000380393 ERI3O43414 337 aaKnown RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 XRCC2O43543 280 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 HMGA1P17096 107 aaKnown RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 RTP5Q14D33 572 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 GDF7Q7Z4P5 450 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 C20orf196Q8IYI0 205 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SIGLECL1Q8N7X8 197 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 OR10G4Q8NGN3 311 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 FNDC9Q8TBE3 224 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 AHSPQ9NZD4 102 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 PTPRDP23468 1912 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 DENND4CQ5VZ89 1909 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 NPIPB7O75200 414 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SERF1AO75920 110 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 TIMP3P35625 211 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SPINT3P49223 89 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ZP4Q12836 540 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ELAVL3Q14576 367 aaKnown RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF788Q6ZQV5 615 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 TMEM45BQ96B21 275 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 TMEM140Q9NV12 185 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 PRSS50Q9UI38 385 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 IER3IP1Q9Y5U9 82 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 A0A1B0GVT2 93 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF840PA6NDX5 716 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SLC17A2O00624 439 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 RHBDL1O75783 438 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 RCBTB2O95199 551 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 HBE1P02100 147 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 HMGN2P05204 90 aaKnown RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 CKMP06732 381 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ATP6V0CP27449 155 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 PSMB5P28074 263 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SUPT4H1P63272 117 aaKnown RBP8.16□□□□□ -1.1
PTPRA-204ENST00000380393 GPM6BQ13491 265 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 LTC4SQ16873 150 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 FCRL6Q6DN72 434 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 OR4C11Q6IEV9 310 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ATOH7Q8N100 152 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 MUC15Q8N387 334 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF676Q8N7Q3 588 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 OR10AC1Q8NH08 325 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 EFCAB11Q9BUY7 163 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 NSG2Q9Y328 171 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 RNF114Q9Y508 228 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 PLXNA4Q9HCM2 1894 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 SPEGQ15772 3267 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 VPS13AQ96RL7 3174 aa8.16□□□□□ -1.1
PTPRA-204ENST00000380393 ALPK2Q86TB3 2170 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 H0Y8G0 127 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 SIVA1O15304 175 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 GDF1P27539 372 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF93P35789 620 aaPredicted RBP8.15□□□□□ -1.1
PTPRA-204ENST00000380393 ID1P41134 155 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 CCR2P41597 374 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 ZNF266Q14584 549 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 PCK2Q16822 640 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 LMLNQ96KR4 655 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 UHRF2Q96PU4 802 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 TAAR6Q96RI8 345 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 NEUROD4Q9HD90 331 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 MRM2Q9UI43 246 aaKnown RBP8.15□□□□□ -1.1
PTPRA-204ENST00000380393 INSL5Q9Y5Q6 135 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 PLPP1O14494 284 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 TYMSP04818 313 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 ATXN8OSP0DMR3 200 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 MLC1Q15049 377 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 CDKN3Q16667 212 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 C9orf135Q5VTT2 229 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 BAGE3Q86Y29 109 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 BAGE2Q86Y30 109 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 OR10G3Q8NGC4 313 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 OR6K6Q8NGW6 343 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 SPXQ9BT56 116 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 RXFP3Q9NSD7 469 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 RHBDD3Q9Y3P4 386 aa8.15□□□□□ -1.1
PTPRA-204ENST00000380393 A0A1B0GTH9 108 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 TNFRSF10CO14798 259 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 CD70P32970 193 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 RBMXP38159 391 aaKnown RBP8.15□□□□□ -1.11
PTPRA-204ENST00000380393 ARF3P61204 181 aaPredicted RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms