RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CEACAM18A8MTB9 384 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 H3BTX0 84 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 TRAF3IP2O43734 574 aaPredicted RBP3.27□□□□□ -1.89
MCF2-203ENST00000370576 ICOSLGO75144 302 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 EIF3GO75821 320 aaKnown RBP eCLIP3.27□□□□□ -1.89
MCF2-203ENST00000370576 IFNA1P01562 189 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 PGA4P0DJD7 388 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 PGA3P0DJD8 388 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 PRKACGP22612 351 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 CCDC6Q16204 474 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 CARTPTQ16568 116 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
MCF2-203ENST00000370576 CREB3L2Q70SY1 520 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 COX8CQ7Z4L0 72 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 C5orf24Q7Z6I8 188 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 NR2C2APQ86WQ0 139 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 CROCCP3Q8IVE0 287 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 RDH10Q8IZV5 341 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 LINC01561Q8N1V8 128 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 STX19Q8N4C7 294 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 PFN4Q8NHR9 129 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 PIK3R3Q92569 461 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 RAB8BQ92930 207 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 ZNF488Q96MN9 340 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 OXGR1Q96P68 337 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 RHNO1Q9BSD3 238 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 BEX2Q9BXY8 128 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 OR52D1Q9H346 318 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 ARMC7Q9H6L4 198 aa3.27□□□□□ -1.89
MCF2-203ENST00000370576 RALYQ9UKM9 306 aaKnown RBP3.27□□□□□ -1.89
MCF2-203ENST00000370576 YARS2Q9Y2Z4 477 aaKnown RBP3.27□□□□□ -1.89
MCF2-203ENST00000370576 ISPDA4D126 451 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZNF724A8MTY0 619 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 A8MVM7 634 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SIRPB1O00241 398 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 PHYHO14832 338 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 MRPS12O15235 138 aaKnown RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 VENTXO95231 258 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SERPINA7P05543 415 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 TNFRSF1BP20333 461 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 WNT4P56705 351 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 RUNX1Q01196 453 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 KRT33BQ14525 404 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 DAZAP2Q15038 168 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 OXA1LQ15070 435 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SRSF7Q16629 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
MCF2-203ENST00000370576 OLIG3Q7RTU3 272 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 MRPL52Q86TS9 123 aaKnown RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR2T33Q8NG76 320 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR11G2Q8NGC1 345 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR4S2Q8NH73 311 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 C11orf45Q8TAV5 145 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 GPR151Q8TDV0 419 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 GPR148Q8TDV2 347 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CASTOR1Q8WTX7 329 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 DCBLD2Q96PD2 775 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR14A2Q96R54 314 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CHMP1AQ9HD42 196 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 MLNRO43193 412 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CA11O75493 328 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR2J2O76002 312 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 NEURL1O76050 574 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 PPP1R3DO95685 299 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 LALBAP00709 142 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CD14P08571 375 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ESDP10768 282 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CRYGSP22914 178 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CHATP28329 748 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 GABRA3P34903 492 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 LEPP41159 167 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SOX3P41225 446 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OR1E2P47887 323 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 EVX1P49640 407 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 GZMKP49863 264 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 KLF5Q13887 457 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 TAL2Q16559 108 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 RSPO1Q2MKA7 263 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 C1orf100Q5SVJ3 147 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZNF730Q6ZMV8 503 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 TMED4Q7Z7H5 227 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 C20orf196Q8IYI0 205 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 JAGN1Q8N5M9 183 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 GATD1Q8NB37 220 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SFRP2Q96HF1 295 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CNBD2Q96M20 576 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZNF835Q9Y2P0 537 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 V9GYS6 101 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CENPVL3A0A0U1RRI6 287 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 TVP23AA6NH52 213 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZNF726A6NNF4 738 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SCRG1O75711 98 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 NDUFB2O95178 105 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 IFNA4P05014 189 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 OPRL1P41146 370 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 DSCR4P56555 118 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 TAS2R43P59537 309 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 RAP1AP62834 184 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 FAM120AOSQ5T036 256 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZFP62Q8NB50 900 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms