RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 DEFB109BQ30KR1 87 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 TSPO2Q5TGU0 170 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 TMEM229BQ8NBD8 167 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OR1F12Q8NHA8 337 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 FAM213BQ8TBF2 198 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 SMIM8Q96KF7 97 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 PRRT1Q99946 306 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OR10A2Q9H208 303 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 DLL3Q9NYJ7 618 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 HSF4Q9ULV5 492 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 RIF1Q5UIP0 2472 aaKnown RBP8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OR5H1A6NKK0 313 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 XRCC2O43543 280 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF32P17041 273 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 WT1P19544 449 aaPredicted RBP8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OR10AD1Q8NGE0 317 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OR52N4Q8NGI2 321 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 TOMM40LQ969M1 308 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 RAB22AQ9UL26 194 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 LIPGQ9Y5X9 500 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 NBASA2RRP1 2371 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 H0YL77 283 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 IFNA10P01566 189 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 IGHV3-9P01782 118 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 FCGR2CP31995 323 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 PPP1CCP36873 323 aaKnown RBP8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 NRN1LQ496H8 165 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 ZNF774Q6NX45 483 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 Q8WTZ3 238 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 CNTD2Q9H8S5 307 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 BCO1Q9HAY6 547 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.03
PRPF38B-203ENST00000370025 CHD3Q12873 2000 aaKnown RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 TRAV17A0A0B4J275 112 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 A0A1B0GWJ7 208 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 K7EPK0 472 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 SYNGR3O43761 229 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 DBHP09172 617 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 CCNOP22674 350 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 ZNF93P35789 620 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 UBE2KP61086 200 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 CLN3Q13286 438 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 C3AR1Q16581 482 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 RSPO1Q2MKA7 263 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 BTNL8Q6UX41 500 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 FAM71E2Q8N5Q1 922 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 OR4D6Q8NGJ1 314 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 DTD1Q8TEA8 209 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 PTX4Q96A99 478 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 APH1AQ96BI3 265 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 NEU1Q99519 415 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 MRPL37Q9BZE1 423 aaKnown RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 ZDHHC11Q9H8X9 412 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 SLC7A10Q9NS82 523 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 RHBDD3Q9Y3P4 386 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 CRTAPO75718 401 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 TUBG1P23258 451 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 GLRA1P23415 457 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 IL2RGP31785 369 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 TMEM33P57088 247 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 IGFL2Q6UWQ7 119 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 PLXDC2Q6UX71 529 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 ZNF100Q8IYN0 542 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 OR14J1Q9UGF5 321 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 DHRS3O75911 302 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 BPNT1O95861 308 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 CRYGSP22914 178 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 RPL12P30050 165 aaKnown RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 FXYD4P59646 89 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 PSG4Q00888 419 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 HEPN1Q6WQI6 88 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 LYPD6Q86Y78 171 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 SAT2Q96F10 170 aaPredicted RBP8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 WDYHV1Q96HA8 205 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 OR2H1Q9GZK4 316 aa8.64□□□□□ -1.03
PRPF38B-203ENST00000370025 OR6C6A6NF89 314 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 NUDT19A8MXV4 375 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 NXPH3O95157 252 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 DUS4LO95620 317 aaKnown RBP8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 DIRAS3O95661 229 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 IGLV3-1P01715 115 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 PATE4P0C8F1 98 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 THBS4P35443 961 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 ERVFRD-1P60508 538 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 ARF1P84077 181 aaKnown RBP8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 UBE2V2Q15819 145 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 IAH1Q2TAA2 248 aaPredicted RBP8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 TMEM182Q6ZP80 229 aaPredicted RBP8.63□□□□□ -1.03
PRPF38B-203ENST00000370025 OR4K15Q8NH41 348 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms