RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 H3BMH7 237 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 PLPP3O14495 311 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 WNT9BO14905 357 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 TBX19O60806 448 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 CST7O76096 145 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 CST4P01036 141 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 RPS4Y1P22090 263 aaKnown RBP4.89□□□□□ -1.63
PTPRD-202ENST00000356435 CRYBB2P43320 205 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 LRRC37AA6NMS7 1700 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 J3KRW8 73 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 FCN1O00602 326 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ATXN7O15265 892 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-202ENST00000356435 NDUFA2O43678 99 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 FTH1P19P0C7X4 201 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 GABRA6Q16445 453 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 LAMTOR1Q6IAA8 161 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 VWA1Q6PCB0 445 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 UNQ9370/PRO34162Q6UXP9 181 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ZNF547Q8IVP9 402 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ZNF596Q8TC21 504 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ZNF737O75373 536 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OPN1MWP04001 364 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OPN1MW2P0DN77 364 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OPN1MW3P0DN78 364 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 PPOXP50336 477 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 STPG1Q5TH74 334 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 UQCC3Q6UW78 93 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OR8I2Q8N0Y5 310 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OR10G4Q8NGN3 311 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OR10G9Q8NGN4 311 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 OR10G7Q8NGN6 311 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ABHD14AQ9BUJ0 271 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 ISG20L2Q9H9L3 353 aaKnown RBP4.89□□□□□ -1.63
PTPRD-202ENST00000356435 PARD6AQ9NPB6 346 aa4.89□□□□□ -1.63
PTPRD-202ENST00000356435 RBBP6Q7Z6E9 1792 aaKnown RBP4.89□□□□□ -1.63
PTPRD-202ENST00000356435 A0A1B0GTL3 188 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 MFSD2BA6NFX1 497 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 B4E171 279 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PTHLHP12272 177 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 DCTDP32321 178 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TSPAN7P41732 249 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 SCAND1P57086 179 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 FABP5Q01469 135 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 DEGS2Q6QHC5 323 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 IL22RA2Q969J5 263 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 METTL26Q96S19 204 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TIMP4Q99727 224 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 LPAR2Q9HBW0 351 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 DSPPQ9NZW4 1301 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 OR2W5A6NFC9 320 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PNLIPP16233 465 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 HIST1H3AP68431 136 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 SLC23A3Q6PIS1 610 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 WFDC3Q8IUB2 231 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 OR5C1Q8NGR4 320 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 C2CD4CQ8TF44 421 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 STARD4Q96DR4 205 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TTTY12Q9BZ98 90 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PIPOXQ9P0Z9 390 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 STRCQ7RTU9 1775 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 COL5A3P25940 1745 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-202ENST00000356435 SFT2D2O95562 160 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 ETHE1O95571 254 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
PTPRD-202ENST00000356435 MEOX2P50222 304 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 DLX1P56177 255 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 CLDN18P56856 261 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 LIAT1Q6ZQX7 453 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PLEKHB1Q9UF11 243 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-202ENST00000356435 KCNK7Q9Y2U2 307 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 INSIG2Q9Y5U4 225 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 ARFGEF1Q9Y6D6 1849 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 HLA-GP17693 338 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 ELOBQ15370 118 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 WDR38Q5JTN6 314 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 HARBI1Q96MB7 349 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PRDM7Q9NQW5 492 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 KCNE3Q9Y6H6 103 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 CITO14578 2027 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PRSS1P07477 247 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TGFBR1P36897 503 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 IL13RA2Q14627 380 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PRICKLE4Q2TBC4 344 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TM4SF20Q53R12 229 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 TEX30Q5JUR7 227 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 LINC00518Q8N0U6 118 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 D2HGDHQ8N465 521 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 OR10J6PQ8NGY7 276 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PPP1R1CQ8WVI7 109 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 DCTN5Q9BTE1 182 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PARP11Q9NR21 331 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 NEU3Q9UQ49 428 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PPIAL4EA0A075B759 164 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PPIAL4DF5H284 164 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 SYNGR2O43760 224 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 CISD3P0C7P0 127 aa4.88□□□□□ -1.63
PTPRD-202ENST00000356435 PPIAL4FP0DN26 164 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms