RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 RNF212Q495C1 297 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 TBC1D26Q86UD7 250 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 MKXQ8IYA7 352 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 PFDN5Q99471 154 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 ANAPC10Q9UM13 185 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 STARD10Q9Y365 291 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 HS3ST3B1Q9Y662 390 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 MUC6Q6W4X9 2439 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF816-ZNF321PA0A0X1KG74 233 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 RBFOX3A6NFN3 312 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 TRAPPC2LH3BP13 241 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 AP4M1O00189 453 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 YIF1AO95070 293 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 SP9P0CG40 484 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 TUBG1P23258 451 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 GPM6AP51674 278 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 IL15RAQ13261 267 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 DTX1Q86Y01 620 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 THNSL2Q86YJ6 484 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 C10orf35Q96D05 121 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 PLEKHF2Q9H8W4 249 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 WSB1Q9Y6I7 421 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 KIAA2026Q5HYC2 2103 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 EIF2S3P41091 472 aaKnown RBP9.1□□□□□ -0.95
COL3A1-202ENST00000317840 NPBWR2P48146 333 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 C4orf17Q53FE4 359 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 ATP1A1-AS1Q5TC04 95 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 GAPTQ8N292 157 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 OR56B2PQ8NGI1 322 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 UBALD1Q8TB05 177 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 INTS12Q96CB8 462 aaKnown RBP9.1□□□□□ -0.95
COL3A1-202ENST00000317840 KLF2Q9Y5W3 355 aaPredicted RBP9.1□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM131Q92545 1883 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 RRP8O43159 456 aaKnown RBP9.1□□□□□ -0.95
COL3A1-202ENST00000317840 SLC34A2O95436 690 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 S100PP25815 95 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 RAB1AP62820 205 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 NKX6-1P78426 367 aaPredicted RBP9.1□□□□□ -0.95
COL3A1-202ENST00000317840 PSG4Q00888 419 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 TLE1Q04724 770 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 C3AR1Q16581 482 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 PSMF1Q92530 271 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 SRXN1Q9BYN0 137 aa9.1□□□□□ -0.95
COL3A1-202ENST00000317840 IGKV1-27A0A075B6S5 117 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TRBV23-1A0A0A0MS06 115 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 OR6C6A6NF89 314 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 H3BQ15 152 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 LINC01387J3KSC0 135 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 FBP1P09467 338 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ALDH3B1P43353 468 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 DYNLT3P51808 116 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 RAC3P60763 192 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TLE4Q04727 773 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 C10orf128Q5T292 105 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF429Q86V71 674 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 C17orf78Q8N4C9 275 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CCDC54Q8NEL0 328 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ABHD3Q8WU67 409 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TAAR9Q96RI9 348 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TOLLIPQ9H0E2 274 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM38BQ9NVV0 291 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 NOSIPQ9Y314 301 aaKnown RBP9.09□□□□□ -0.95
COL3A1-202ENST00000317840 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 C5orf49A4QMS7 147 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 H0YL77 283 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CYB5BO43169 146 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CTSSP25774 331 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF154Q13106 437 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 HIST3H3Q16695 136 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 LILRB2Q8N423 598 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM252Q8N6L7 170 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 SH3BGRL2Q9UJC5 107 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 HSF4Q9ULV5 492 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 IGKV1-12A0A0C4DH73 117 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CHST1O43916 411 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CA11O75493 328 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 IGKV1D-12P01611 117 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CLDN15P56746 228 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 RSPO1Q2MKA7 263 aaPredicted RBP9.09□□□□□ -0.95
COL3A1-202ENST00000317840 FAM209BQ5JX69 171 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CALHM1Q8IU99 346 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 OR10D3Q8NH80 312 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 NABP1Q96AH0 204 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 MOB3AQ96BX8 217 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 CCL28Q9NRJ3 127 aa9.09□□□□□ -0.95
COL3A1-202ENST00000317840 ZIC3O60481 467 aa9.08□□□□□ -0.96
COL3A1-202ENST00000317840 SCTP09683 121 aa9.08□□□□□ -0.96
COL3A1-202ENST00000317840 TRIP6Q15654 476 aaKnown RBP9.08□□□□□ -0.96
COL3A1-202ENST00000317840 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
COL3A1-202ENST00000317840 CNEP1R1Q8N9A8 125 aa9.08□□□□□ -0.96
COL3A1-202ENST00000317840 NTNG2Q96CW9 530 aa9.08□□□□□ -0.96
COL3A1-202ENST00000317840 GINS3Q9BRX5 216 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms