RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CHST6Q9GZX3 395 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 LPAR5Q9H1C0 372 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 PPA2Q9H2U2 334 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 RAB9BQ9NP90 201 aa14.79□□□□□ -0.04
SSSCA1-201ENST00000309328 TRGV10A0A0A0MS01 117 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 POM121CA8CG34 1229 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 ZNF701M0R085 212 aaPredicted RBP14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 EDDM3AQ14507 147 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 CR1LQ2VPA4 569 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 KRBOX4Q5JUW0 171 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 IDNKQ5T6J7 187 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 OR10K2Q6IF99 312 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 FAM185AQ8N0U4 392 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 ZNF565Q8N9K5 539 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 NEK7Q8TDX7 302 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 DCSTAMPQ9H295 470 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 NDUFA13Q9P0J0 144 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 HSF4Q9ULV5 492 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 UBE2J1Q9Y385 318 aaPredicted RBP14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 PEX16Q9Y5Y5 336 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 TLN2Q9Y4G6 2542 aa14.78□□□□□ -0.04
SSSCA1-201ENST00000309328 A0A0A6YYH2 397 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 TMEM30CPA0ZSE6 113 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 ODAMA1E959 279 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 A6NJ64 397 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 CLEC2LP0C7M8 214 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 BLVRBP30043 206 aaPredicted RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 SOX6P35712 828 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 BPIFB3P59826 476 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 SLC35E4Q6ICL7 350 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 CORO2AQ92828 525 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 TMPRSS13Q9BYE2 586 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 NAA50Q9GZZ1 169 aaKnown RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 GAL3ST2Q9H3Q3 398 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 RIMS4Q9H426 269 aaPredicted RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 GSX1Q9H4S2 264 aaPredicted RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 METTL8Q9H825 291 aaKnown RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 UNKLQ9H9P5 680 aaKnown RBP14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 PLEKHJ1Q9NW61 149 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 TAS2R3Q9NYW6 316 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 SPATA2Q9UM82 520 aa14.77□□□□□ -0.05
SSSCA1-201ENST00000309328 SMIM31A0A1B0GVY4 71 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 SMIM30A4D0T7 59 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 ZNF728P0DKX0 622 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 SLC2A2P11168 524 aaPredicted RBP14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 CHATP28329 748 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 ATXN7L3Q14CW9 347 aaPredicted RBP14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 PDCD1Q15116 288 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 FAM120AOSQ5T036 256 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 NCR3LG1Q68D85 454 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 TMEM200BQ69YZ2 307 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 NANPQ8TBE9 248 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 PHF21AQ96BD5 680 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 UPRTQ96BW1 309 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 ISOC1Q96CN7 298 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 CMTM3Q96MX0 182 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 ZNF714Q96N38 554 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 WDFY2Q96P53 400 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 C19orf12Q9NSK7 152 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 ONECUT1Q9UBC0 465 aa14.76□□□□□ -0.05
SSSCA1-201ENST00000309328 HSPB6O14558 160 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 TOX4O94842 621 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 TGFBR1P36897 503 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 AESQ08117 197 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 RSBN1Q5VWQ0 802 aaPredicted RBP14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 SIGIRRQ6IA17 410 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 MZT2AQ6P582 158 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 TRAT1Q6PIZ9 186 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 ZNF497Q6ZNH5 498 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 TRAPPC6BQ86SZ2 158 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 ZNF554Q86TJ5 538 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 FGFRL1Q8N441 504 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 OR4M1Q8NGD0 313 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 LGALS14Q8TCE9 139 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 COQ2Q96H96 371 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 ETAA1Q9NY74 926 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 OPN4Q9UHM6 478 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 ABCA2Q9BZC7 2435 aa14.75□□□□□ -0.05
SSSCA1-201ENST00000309328 MTORP42345 2549 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 MEIKINA0A087WXM9 373 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 SERPINE3A8MV23 424 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 ZNF182P17025 639 aaPredicted RBP14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 GZMHP20718 246 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 PRTN3P24158 256 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 VEGFCP49767 419 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 ARF6P62330 175 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 GUCA2AQ02747 115 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 CHRFAM7AQ494W8 412 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 NKAPLQ5M9Q1 402 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 METAP1DQ6UB28 335 aaPredicted RBP14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 Q6ZTK2 550 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 GAPTQ8N292 157 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 BPIFB2Q8N4F0 458 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 OR10R2Q8NGX6 335 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 RAB3CQ96E17 227 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 NICN1Q9BSH3 213 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 BEX2Q9BXY8 128 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 SIRPDQ9H106 197 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 KCNK15Q9H427 330 aa14.74□□□□□ -0.05
SSSCA1-201ENST00000309328 RHBDL2Q9NX52 303 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms