RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CHATP28329 748 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 PRDX2P32119 198 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 GLP1RP43220 463 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 PITPNBP48739 271 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 RORCP51449 518 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ERVFRD-1P60508 538 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 LMO4P61968 165 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 MRPS11P82912 194 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 KRTAP1-1Q07627 177 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF273Q14593 569 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 IL13RA2Q14627 380 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 GRK1Q15835 563 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 MICBQ29980 383 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ELP2Q6IA86 826 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 RAB12Q6IQ22 244 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CNIH2Q6PI25 160 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 BAIAP2L2Q6UXY1 529 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF788Q6ZQV5 615 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 C17orf107Q6ZR85 190 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 OR2W3Q7Z3T1 314 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 LRRC28Q86X40 367 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM185AQ8N0U4 392 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 C1orf87Q8N0U7 546 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 LRRC75A-AS1Q8N1F1 130 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CHST4Q8NCG5 386 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CCDC107Q8WV48 283 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 H1FXQ92522 213 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 RAB1CQ92928 201 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ERGIC1Q969X5 290 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FOXRED1Q96CU9 486 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CPNE2Q96FN4 548 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 TIMD4Q96H15 378 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 SMR3AQ99954 134 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 FOXC2Q99958 501 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 DPCDQ9BVM2 203 aaPredicted RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 TM2D1Q9BX74 207 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 PECRQ9BY49 303 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 REG4Q9BYZ8 158 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 CST11Q9H112 138 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 AUNIPQ9H7T9 357 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 PATZ1Q9HBE1 687 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 AK3Q9UIJ7 227 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 KIF25Q9UIL4 384 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 KCNK7Q9Y2U2 307 aa5.37□□□□□ -1.55
DEPDC4-201ENST00000299185 ARID1AO14497 2285 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 CRYBG3Q68DQ2 2970 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 TRAV18A0A075B6X5 111 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV3OR16-10A0A075B7F0 116 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 IGKV1D-8A0A087WSZ0 117 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 TRAV38-1A0A0B4J264 116 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 RAB27BO00194 218 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 MFNGO00587 321 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 DEGS1O15121 323 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 RGS5O15539 181 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SSX5O60225 188 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 PDCD6O75340 191 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 ACAA1P09110 424 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 CSF3P09919 207 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 UBBP0CG47 229 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV4-31P0DP07 118 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 BLVRBP30043 206 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 CFHR2P36980 270 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 GLIPR1P48060 266 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 BMXP51813 675 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM50BP56557 158 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 EDDM3BP56851 147 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 TAS2R20P59543 309 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 IL13RA1P78552 427 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 AESQ08117 197 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 KLRD1Q13241 179 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 LTC4SQ16873 150 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 UBE2NLQ5JXB2 153 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 PRAMEF5Q5TYX0 476 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 METTL11BQ5VVY1 283 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 WDR25Q64LD2 544 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF841Q6ZN19 808 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 PEG10Q86TG7 708 aaKnown RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SNX29P2Q8IUI4 249 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 CDH26Q8IXH8 852 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 Q8IYB0 196 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SPICQ8N5J4 248 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 Q8NFD4 153 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 OR8B3Q8NGG8 313 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 OR13A1Q8NGR1 328 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 OR4K15Q8NH41 348 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 KCNG3Q8TAE7 436 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 NEIL1Q96FI4 390 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SDSLQ96GA7 329 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 EAF1Q96JC9 268 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 OR8B2Q96RD0 313 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 FAAP24Q9BTP7 215 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 NXF2Q9GZY0 626 aaKnown RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SHARPINQ9H0F6 387 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 MYOZ1Q9NP98 299 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 MMP26Q9NRE1 261 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 RCC2Q9P258 522 aaKnown RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 EXTL2Q9UBQ6 330 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SLC25A10Q9UBX3 287 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF230Q9UIE0 474 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 SPATA2Q9UM82 520 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms