RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
TRIM55-201ENST00000276573 LOC400499M0QZD8 3231 aa8.13□□□□□ -1.11
TRIM55-201ENST00000276573 IGKV1-6A0A0C4DH72 117 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 IGHV3-64DA0A0J9YX35 117 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 RP2O75695 350 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 DIRAS3O95661 229 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 OR2H2O95918 312 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 TK1P04183 234 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-201ENST00000276573 FAM27E3Q08E93 113 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 IL15RAQ13261 267 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 TMEM187Q14656 261 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 HERPUD1Q15011 391 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 RGS7BPQ6MZT1 257 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-201ENST00000276573 ALKBH2Q6NS38 261 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 GFRALQ6UXV0 394 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 OR5T2Q8NGG2 359 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 RTN4IP1Q8WWV3 396 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-201ENST00000276573 GALNT14Q96FL9 552 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 TLNRD1Q9H1K6 362 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 TMEM165Q9HC07 324 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 HES4Q9HCC6 221 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 MSL2Q9HCI7 577 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 RASL12Q9NYN1 266 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 TREM2Q9NZC2 230 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF835Q9Y2P0 537 aa8.12□□□□□ -1.11
TRIM55-201ENST00000276573 SIRPB1O00241 398 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SLC33A1O00400 549 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 BET1O15155 118 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 KCNJ3P48549 501 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF345Q14585 488 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ATXN7L3Q14CW9 347 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SP6Q3SY56 376 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PAN3Q58A45 887 aaKnown RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 C1QTNF12Q5T7M4 302 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SHEQ5VZ18 495 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF826PQ6ZT77 177 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SUCNR1Q9BXA5 334 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PIGMQ9H3S5 423 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SLC2A9Q9NRM0 540 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 MBD2Q9UBB5 411 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SPEF1Q9Y4P9 236 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PRRC2CQ9Y520 2896 aaKnown RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 TRBV6-7A0A0A0MS04 114 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 RNF222A6NCQ9 220 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 H0YIZ8 118 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 H7C1Q1 480 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 TUSC2O75896 110 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 CRYAAP02489 173 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 LYL1P12980 280 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF250P15622 560 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 RCC1P18754 421 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 BMP5P22003 454 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 LMO1P25800 156 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 GNRHRP30968 328 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PRAMEF6Q5VXH4 476 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PCSK4Q6UW60 755 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ZNF497Q6ZNH5 498 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SLC51BQ86UW2 128 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 LRP11Q86VZ4 500 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 GAPTQ8N292 157 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 LRTM2Q8N967 370 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 CCDC71LQ8N9Z2 235 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 OR4A4PQ8NGN8 299 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 OR11L1Q8NGX0 322 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PLPPR1Q8TBJ4 325 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 SNRNP40Q96DI7 357 aaKnown RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 VRK1Q99986 396 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-201ENST00000276573 GSX2Q9BZM3 304 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 Q9UFV3 132 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
TRIM55-201ENST00000276573 ANKRD34BA5PLL1 514 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 WNT9BO14905 357 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MPPED1O15442 326 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 B3GALNT1O75752 331 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 IFNA21P01568 189 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 IGHV3-13P01766 116 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 OR5AC1P0C628 307 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 GLRXP35754 106 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 TMPRSS3P57727 454 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 HLA-DRB3P79483 266 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MZT1Q08AG7 82 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 GGNBP1Q5YKI7 109 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 FIP1L1Q6UN15 594 aaKnown RBP8.1□□□□□ -1.11
TRIM55-201ENST00000276573 WDR82Q6UXN9 313 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 LIAT1Q6ZQX7 453 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 C22orf34Q6ZV56 151 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 MRGPRGQ86SM5 289 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 LDLRAD3Q86YD5 345 aa8.1□□□□□ -1.11
TRIM55-201ENST00000276573 FAM185AQ8N0U4 392 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms