RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 HSBP1O75506 76 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 DTYMKP23919 212 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 HOGA1Q86XE5 327 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 OR11L1Q8NGX0 322 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 OR2V1Q8NHB1 315 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 SLX1AQ9BQ83 275 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 NPTNQ9Y639 398 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 MDC1Q14676 2089 aaKnown RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 DXOO77932 396 aaKnown RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 SCARF2Q96GP6 870 aaPredicted RBP10.14□□□□□ -0.79
VPS33A-201ENST00000267199 GGACTQ9BVM4 153 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 KLRC4-KLRK1H3BQV0 150 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 MPPED1O15442 326 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 FAM157BP0CG42 384 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 SCGB2A2Q13296 93 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 ZDHHC23Q8IYP9 409 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 OR5B3Q8NH48 314 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 KCNE4Q8WWG9 221 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 RARRES2Q99969 163 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 ELOVL1Q9BW60 279 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 LPAR5Q9H1C0 372 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
VPS33A-201ENST00000267199 FREM3P0C091 2139 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 TRAV14DV4A0A0A6YYC5 116 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 DDTP30046 118 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 RPS11P62280 158 aaKnown RBP eCLIP10.13□□□□□ -0.79
VPS33A-201ENST00000267199 SRSF3P84103 164 aaKnown RBP10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PNRC1Q12796 327 aaPredicted RBP10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PLGLAQ15195 96 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 ACER2Q5QJU3 275 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 ZNF343Q6P1L6 599 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 APCDD1LQ8NCL9 501 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 TRBV5-7A0A0A0MS05 114 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 RNF222A6NCQ9 220 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 SPINT2O43291 252 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 RAB35Q15286 201 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 SOX7Q9BT81 388 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 FKBP11Q9NYL4 201 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 TGIF2-C20orf24A0A0A6YYL0 155 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PGA4P0DJD7 388 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PGA5P0DJD9 388 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 RBMXL3Q8N7X1 1067 aaKnown RBP10.13□□□□□ -0.79
VPS33A-201ENST00000267199 RAB40CQ96S21 281 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 GPHA2Q96T91 129 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 C5orf66Q9H5L9 145 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 PITPNC1Q9UKF7 332 aa10.13□□□□□ -0.79
VPS33A-201ENST00000267199 FCN1O00602 326 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 ADAM11O75078 769 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 PPYP01298 95 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 HKR1P10072 659 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CCL2P13500 99 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 FAM3AP98173 230 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 PIGYQ3MUY2 71 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 GAPTQ8N292 157 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 ADAMTS17Q8TE56 1095 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 SPSB2Q99619 263 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 DEFB127Q9H1M4 99 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 SH3BGRL3Q9H299 93 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CLN5O75503 358 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 FBP1P09467 338 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 OR10J4P0C629 311 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 RNF224P0DH78 156 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 PTTG1IPP53801 180 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 OR5I1Q13606 314 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CLDN23Q96B33 292 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 FER1L6-AS2Q96M78 137 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 FSCN3Q9NQT6 498 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CCL28Q9NRJ3 127 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TSPAN2O60636 221 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 AMTP48728 403 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 OR10G4Q8NGN3 311 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 OR10G9Q8NGN4 311 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 OR10G7Q8NGN6 311 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 ATP5SQ99766 215 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CD8AP01732 235 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 ROM1Q03395 351 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TMEM183BQ1AE95 376 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 TBC1D28Q2M2D7 210 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.12□□□□□ -0.79
VPS33A-201ENST00000267199 WDR25Q64LD2 544 aaPredicted RBP10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CMTM2Q8TAZ6 248 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 Q9N2K0 584 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 CLEC1BQ9P126 229 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 NAT8Q9UHE5 227 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 LOXL2Q9Y4K0 774 aa10.12□□□□□ -0.79
VPS33A-201ENST00000267199 IGLV1-36A0A0B4J1U3 117 aa10.11□□□□□ -0.79
VPS33A-201ENST00000267199 CD74P04233 296 aa10.11□□□□□ -0.79
VPS33A-201ENST00000267199 VDAC1P21796 283 aa10.11□□□□□ -0.79
VPS33A-201ENST00000267199 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
VPS33A-201ENST00000267199 GAS1P54826 345 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms