RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 GLRX2Q9NS18 164 aa16.36■□□□□ 0.21
COL4A3BP-201ENST00000261415 RAB27BO00194 218 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 GAPDHP04406 335 aaKnown RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 NPSP0C0P6 89 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZNF823P16415 610 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 GNALP38405 381 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 RIPPLY2Q5TAB7 128 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 NUFIP2Q7Z417 695 aaKnown RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 OTOSQ8NHW6 89 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 C11orf40Q8WZ69 217 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 ZNF837Q96EG3 531 aaPredicted RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 RBM24Q9BX46 236 aaKnown RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 FBXO7Q9Y3I1 522 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 USP24Q9UPU5 2620 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 TRBV5-5A0A0J9YX44 114 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 LOC100289279A0A1B0GTE1 492 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 WDR1O75083 606 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 SS18L1O75177 396 aaPredicted RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 DFFBO76075 338 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 IGHV3-9P01782 118 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 RPLP1P05386 114 aaKnown RBP16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 LY6DQ14210 128 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 MIDNQ504T8 468 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 TSPO2Q5TGU0 170 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 C9orf106Q8NAJ2 232 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 OR5AK2Q8NH90 309 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 FAM57AQ8TBR7 257 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 APH1AQ96BI3 265 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 LINC00470Q9BZP3 86 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 TMEM14AQ9Y6G1 99 aa16.35■□□□□ 0.21
COL4A3BP-201ENST00000261415 TMEM210A6NLX4 147 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 FIGNL2A6NMB9 653 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 MAS1P04201 325 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 TACSTD2P09758 323 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 ALOX5APP20292 161 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 TAS2R31P59538 309 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 SOHLH1Q5JUK2 328 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 FOXL2NBQ6ZUU3 175 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 THNSL2Q86YJ6 484 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 GCNT2Q8N0V5 402 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 JAGN1Q8N5M9 183 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 Q8WTZ3 238 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 PRR32B1ATL7 298 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 TRGC2P03986 189 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 ERCC1P07992 297 aaPredicted RBP16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 EPHA1P21709 976 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 NANOS3P60323 173 aaKnown RBP16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 PCK2Q16822 640 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 GPR148Q8TDV2 347 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 C12orf49Q9H741 205 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 SLC7A10Q9NS82 523 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 V9GYS6 101 aa16.34■□□□□ 0.21
COL4A3BP-201ENST00000261415 A0A1B0GW64 132 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 GUSBP1Q15486 140 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 RTL6Q6ICC9 239 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 GFRALQ6UXV0 394 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 NAXEQ8NCW5 288 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR14K1Q8NGZ2 314 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 AMELYQ99218 206 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 NELFAQ9H3P2 528 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 GPR35Q9HC97 309 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 RAB18Q9NP72 206 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 CXCL1P09341 107 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR5AC1P0C628 307 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 CD37P11049 281 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 PTGER4P35408 488 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 ERVFC1-1P60608 527 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 KCNMB1Q16558 191 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 HAGHQ16775 308 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 C2orf76Q3KRA6 126 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 LINC00346Q8IVM7 164 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 FOXRED2Q8IWF2 684 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF100Q8IYN0 542 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 CPT1CQ8TCG5 803 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 THRSPQ92748 146 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 NABP1Q96AH0 204 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 FAM3DQ96BQ1 224 aa16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 PUS1Q9Y606 427 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL4A3BP-201ENST00000261415 MBD3L4A6NDZ8 208 aaPredicted RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 MBD3L3A6NE82 208 aaPredicted RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 MBD3L5A6NJ08 208 aaPredicted RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 CYB5BO43169 146 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 SOX15O60248 233 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 GUCA1AP43080 201 aaPredicted RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 SOX2P48431 317 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 EIF2B1Q14232 305 aaKnown RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 RAB11BQ15907 218 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 CEACAM16Q2WEN9 425 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 C1orf185Q5T7R7 199 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 SLC18B1Q6NT16 456 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 PCSK4Q6UW60 755 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 SEM1Q6ZVN7 128 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 FAM214BQ7L5A3 538 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 ZNF584Q8IVC4 421 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 LFNGQ8NES3 379 aa16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
COL4A3BP-201ENST00000261415 OR5AC2Q9NZP5 309 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms