RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 UTS2O95399 124 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 ESDP10768 282 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 AURKAIP1Q9NWT8 199 aaPredicted RBP11.33□□□□□ -0.6
VAMP4-201ENST00000236192 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 S1PR2O95136 353 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 VDAC1P21796 283 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 TAS2R45P59539 299 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 C9JQL5 133 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 ARR3P36575 388 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 C1QL3Q5VWW1 255 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 OR8I2Q8N0Y5 310 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 SLC25A43Q8WUT9 341 aaPredicted RBP11.33□□□□□ -0.6
VAMP4-201ENST00000236192 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 J3QRE1 110 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 COL9A2Q14055 689 aaPredicted RBP11.33□□□□□ -0.6
VAMP4-201ENST00000236192 ST6GALNAC3Q8NDV1 305 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 PRSS27Q9BQR3 290 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 MMP25Q9NPA2 562 aa11.33□□□□□ -0.6
VAMP4-201ENST00000236192 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 M0QZ24 198 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 UPK3AO75631 287 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 PSG1P11464 419 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 DAPP1Q9UN19 280 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 SGCBQ16585 318 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 ZNRF4Q8WWF5 429 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 VAMP5O95183 116 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 PAX2Q02962 417 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 LHFPL2Q6ZUX7 228 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 GABRG3Q99928 467 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 SEPSECSQ9HD40 501 aaKnown RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 KISS1Q15726 138 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 EXT1Q16394 746 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 ZXDCQ2QGD7 858 aaPredicted RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 C1orf100Q5SVJ3 147 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
VAMP4-201ENST00000236192 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
VAMP4-201ENST00000236192 SLC17A3O00476 420 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 HSPB6O14558 160 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 SERF1AO75920 110 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 GPR12P47775 334 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 PRRG4Q9BZD6 226 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 HS3ST3A1Q9Y663 406 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF646O15015 1829 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-201ENST00000236192 LOC102725191A0A1B0GVB3 256 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 K7N7A8 449 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 SYNGR2O43760 224 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 PTGER4P35408 488 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 RABIFP47224 123 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
VAMP4-201ENST00000236192 OR51B4Q9Y5P0 310 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 CRYAAP02489 173 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 C8AP07357 584 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF735P0CB33 412 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 TMEM50BP56557 158 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 H1FNTQ75WM6 255 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-201ENST00000236192 LSRQ86X29 649 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-201ENST00000236192 OR5A1Q8NGJ0 315 aa11.31□□□□□ -0.6
VAMP4-201ENST00000236192 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 DEGS1O15121 323 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 APODP05090 189 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 FLT3LGP49771 235 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 TCL1AP56279 114 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 SELENOVP59797 346 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 PARM1Q6UWI2 310 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 ZNF793Q6ZN11 406 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 MRPS18CQ9Y3D5 142 aaKnown RBP11.3□□□□□ -0.6
VAMP4-201ENST00000236192 IGHV1-69-2A0A0G2JMI3 117 aa11.3□□□□□ -0.6
VAMP4-201ENST00000236192 TNFSF15O95150 251 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms