RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 LINC00312Q9Y6C7 94 aa9.28□□□□□ -0.92
SF3B6-201ENST00000233468 SLC33A1O00400 549 aaPredicted RBP9.27□□□□□ -0.93
SF3B6-201ENST00000233468 SLC22A1O15245 554 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 PSPNO60542 156 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 ZNF728P0DKX0 622 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 FGF9P31371 208 aaPredicted RBP9.27□□□□□ -0.93
SF3B6-201ENST00000233468 OR3A1P47881 315 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 ERVFRD-1P60508 538 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 TNP2Q05952 138 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 RAB11BQ15907 218 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 PIGYQ3MUY2 71 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 KRBOX4Q5JUW0 171 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 Q6P435 159 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 METAP1DQ6UB28 335 aaPredicted RBP9.27□□□□□ -0.93
SF3B6-201ENST00000233468 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 FGFRL1Q8N441 504 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 ZNF565Q8N9K5 539 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 OR4S1Q8NGB4 309 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 OR4D6Q8NGJ1 314 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 LHX4Q969G2 390 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 GAL3ST2Q9H3Q3 398 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 NCOR1P1Q9H4R4 102 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 C19orf12Q9NSK7 152 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 OR6C3Q9NZP0 311 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 V9GY05 133 aa9.27□□□□□ -0.93
SF3B6-201ENST00000233468 IGHV1-69DA0A0B4J2H0 117 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 MCRIP1C9JLW8 97 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 SLC17A2O00624 439 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 GEMIN2O14893 280 aaKnown RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 IGHV1-69P01742 117 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 GLAP06280 429 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 IGHV4-38-2P0DP08 117 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 CD37P11049 281 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 ARSBP15848 533 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 MGMTP16455 207 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 CD36P16671 472 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 UBE2E1P51965 193 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 GP2P55259 537 aaKnown RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 KLF17Q5JT82 389 aaPredicted RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 ATAD3CQ5T2N8 411 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 C22orf42Q6IC83 251 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 GDPGP1Q6ZNW5 385 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 OR2W3Q7Z3T1 314 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 TPRA1Q86W33 373 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 OR13D1Q8NGV5 346 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 KCTD7Q96MP8 289 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 URM1Q9BTM9 101 aaKnown RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 DPCDQ9BVM2 203 aaPredicted RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 TMEM59Q9BXS4 323 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 SELENOIQ9C0D9 397 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 PPIL3Q9H2H8 161 aaKnown RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 PPA2Q9H2U2 334 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 RAB9BQ9NP90 201 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 TAS2R3Q9NYW6 316 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 FAM96BQ9Y3D0 163 aa9.26□□□□□ -0.93
SF3B6-201ENST00000233468 AK6Q9Y3D8 172 aaKnown RBP9.26□□□□□ -0.93
SF3B6-201ENST00000233468 PKD1L1Q8TDX9 2849 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 TRAV24A0A0B4J272 114 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 CENPVL3A0A0U1RRI6 287 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 ODAMA1E959 279 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 C17orf98A8MV24 154 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 CA11O75493 328 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 MPIG6BO95866 241 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 RAB3BP20337 219 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 FUT3P21217 361 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 PAX5Q02548 391 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 AESQ08117 197 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 TAF9Q16594 264 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 OR52W1Q6IF63 320 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 SUMF2Q8NBJ7 301 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 CORO2AQ92828 525 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 NEDD4LQ96PU5 975 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 NKX3-1Q99801 234 aaPredicted RBP9.25□□□□□ -0.93
SF3B6-201ENST00000233468 ZMAT3Q9HA38 289 aaKnown RBP9.25□□□□□ -0.93
SF3B6-201ENST00000233468 SIRT7Q9NRC8 400 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 ZNF69Q9UC07 566 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 STEAP1Q9UHE8 339 aa9.25□□□□□ -0.93
SF3B6-201ENST00000233468 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 TMEM30CPA0ZSE6 113 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 TRIM77I1YAP6 450 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 HSPB6O14558 160 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 GZMHP20718 246 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 LGALS4P56470 323 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 ZNF273Q14593 569 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 ATXN7L3Q14CW9 347 aaPredicted RBP9.24□□□□□ -0.93
SF3B6-201ENST00000233468 MIDNQ504T8 468 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 SLC35E4Q6ICL7 350 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 Q8N7P7 452 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.24□□□□□ -0.93
SF3B6-201ENST00000233468 ZFAND2BQ8WV99 257 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 FAM46BQ96A09 425 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 FAM3DQ96BQ1 224 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 Q96M66 194 aa9.24□□□□□ -0.93
SF3B6-201ENST00000233468 C1orf147Q96MC9 270 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms